Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G07790 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 0.0e+00 1177.5 617 100.0
AL6G18130 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 4.8e-282 974.2 621 84.7
Carub.0006s0671 Capsella rubella HOM05D011375 ORTHO05D013410 4.7e-237 824.7 636 73.9
Sp6g35150 Schrenkiella parvula HOM05D011375 ORTHO05D013410 9.3e-177 624.4 637 61.7
CARHR205390 Cardamine hirsuta HOM05D011375 ORTHO05D013410 6.5e-162 575.1 631 59.9
Thhalv10015619m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 2.0e-118 430.6 526 55.5
Aa31LG3G18680 Aethionema arabicum HOM05D011375 ORTHO05D013410 8.6e-114 415.2 650 47.7
BolC3t12926H Brassica oleracea HOM05D011375 ORTHO05D013410 9.5e-113 411.8 627 50.1
C03p03880 Brassica napus HOM05D011375 ORTHO05D013410 1.2e-112 411.4 631 50.7
A03p03460 Brassica napus HOM05D011375 ORTHO05D013410 1.3e-109 401.4 625 50.1
BraA03t09696Z Brassica rapa HOM05D011375 ORTHO05D013410 1.2e-99 368.2 628 47.5
AT5G61300 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 3.0e-58 230.7 635 36.5
THA.LOC104801405 Tarenaya hassleriana HOM05D011375 ORTHO05D013410 2.8e-56 224.2 692 34.8
Carub.0008s2198 Capsella rubella HOM05D011375 ORTHO05D013410 1.8e-55 221.5 652 35.7
AL8G37960 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 2.0e-54 218.0 648 35.2
Thhalv10003964m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 5.9e-54 216.5 624 36.2
CARHR275060 Cardamine hirsuta HOM05D011375 ORTHO05D013410 2.2e-32 144.8 636 31.0
Cpa.g.sc13.308 Carica papaya HOM05D001536 ORTHO05D001442 2.9e-08 64.7 689 23.2
Dinv10677 Davidia involucrata HOM05D001536 ORTHO05D001442 8.3e-08 63.2 218 32.6
Migut.L01226 Erythranthe guttata HOM05D001536 ORTHO05D001442 1.1e-07 62.8 238 31.5
CARHR062240 Cardamine hirsuta HOM05D001536 ORTHO05D001442 2.4e-07 61.6 228 27.6
SHI27316 Sapria himalayana HOM05D001536 ORTHO05D001442 3.2e-07 61.2 99 35.4
Thecc.03G095800 Theobroma cacao HOM05D001536 ORTHO05D001442 4.1e-07 60.8 141 36.9
Sed0011907 Sechium edule HOM05D001536 ORTHO05D001442 7.0e-07 60.1 158 29.1
SGA_v2.0_scaffold36G14432 Striga asiatica HOM05D001536 ORTHO05D001442 9.2e-07 59.7 217 29.0
BcaB08g34348 Brassica carinata HOM05D001536 ORTHO05D001442 1.2e-06 59.3 249 27.7
COL.COLO4_38302 Corchorus olitorius HOM05D001536 ORTHO05D001442 1.2e-06 59.3 159 34.6
Manes.06G088300 Manihot esculenta HOM05D001536 ORTHO05D001442 1.2e-06 59.3 731 24.4
Manes.14G082800 Manihot esculenta HOM05D001536 ORTHO05D001442 1.6e-06 58.9 281 26.0
A08p32160 Brassica napus HOM05D001536 ORTHO05D001442 2.7e-06 58.2 206 28.2
BraA08t35140Z Brassica rapa HOM05D001536 ORTHO05D001442 2.7e-06 58.2 206 28.2
Duzib068G0802 Durio zibethinus HOM05D001536 ORTHO05D001442 4.6e-06 57.4 158 35.4
Rhsim08G0149900 Rhododendron simsii HOM05D001536 ORTHO05D001442 5.9e-06 57.0 701 25.1
TWI60G0848 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 5.9e-06 57.0 134 31.3
CANSAT50G0006 Cannabis sativa HOM05D001536 ORTHO05D001442 7.8e-06 56.6 104 35.6


User provided reference genes

Program Settings