Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G07730 Arabidopsis thaliana HOM05D010063 ORTHO05D011941 7.2e-134 480.7 265 100.0
AL6G18100 Arabidopsis lyrata HOM05D010063 ORTHO05D011941 9.7e-107 390.6 264 85.6
CARHR205420 Cardamine hirsuta HOM05D010063 ORTHO05D011941 1.2e-80 303.9 263 72.2
Thhalv10014431m.g Eutrema salsugineum HOM05D010063 ORTHO05D011941 1.3e-71 273.9 268 63.8
Carub.0006s0669 Capsella rubella HOM05D010063 ORTHO05D011941 1.5e-70 270.4 257 63.8
Sp6g35170 Schrenkiella parvula HOM05D010063 ORTHO05D011941 6.4e-66 255.0 276 56.2
A03p03440 Brassica napus HOM05D010063 ORTHO05D011941 1.4e-60 237.3 269 58.4
BraA03t09694Z Brassica rapa HOM05D010063 ORTHO05D011941 2.4e-60 236.5 269 58.7
Aa31LG3G18710 Aethionema arabicum HOM05D010063 ORTHO05D011941 2.6e-59 233.0 287 58.5
BcaB01g06057 Brassica carinata HOM05D010063 ORTHO05D011941 4.9e-58 228.8 266 57.5
BolC3t12923H Brassica oleracea HOM05D010063 ORTHO05D011941 4.9e-58 228.8 266 57.5
C03p03860 Brassica napus HOM05D010063 ORTHO05D011941 1.0e-55 221.1 266 56.8
THA.LOC104818323 Tarenaya hassleriana HOM05D010063 ORTHO05D011941 4.2e-49 199.1 281 46.3
CARHR275120 Cardamine hirsuta HOM05D010063 ORTHO05D011941 6.2e-29 132.1 262 42.4
AL8G38030 Arabidopsis lyrata HOM05D010063 ORTHO05D011941 3.1e-28 129.8 267 38.2
AT5G61360 Arabidopsis thaliana HOM05D010063 ORTHO05D011941 1.3e-26 124.4 263 36.9
Carub.0008s2203 Capsella rubella HOM05D010063 ORTHO05D011941 7.7e-19 98.6 242 35.5
BcaB01g06055 Brassica carinata HOM05D010063 ORTHO05D011941 1.6e-16 90.9 68 69.1
BraA03t13816Z Brassica rapa HOM05D010063 ORTHO05D011941 3.0e-15 86.7 235 35.3
A03p46960 Brassica napus HOM05D010063 ORTHO05D011941 3.3e-14 83.2 223 34.5
Ciclev10022335m.g Citrus clementina HOM05D008369 ORTHO05D005932 1.1e-12 78.2 251 27.9
BraA03t13818Z Brassica rapa HOM05D010063 ORTHO05D011941 1.2e-11 74.7 93 45.2
Manes.06G089401 Manihot esculenta HOM05D000041 ORTHO05D006140 2.0e-11 73.9 111 37.8
Cfa019277 Carpinus fangiana HOM05D008369 ORTHO05D005932 6.5e-10 68.9 241 29.5
C07p45000 Brassica napus HOM05D010063 ORTHO05D011941 1.4e-09 67.8 71 52.1
COL.COLO4_36949 Corchorus olitorius HOM05D008369 ORTHO05D005932 1.4e-07 61.2 62 46.8
Nitab4.5_0001211g0150 Nicotiana tabacum HOM05D012087 ORTHO05D005932 5.1e-07 59.3 261 26.8
HanXRQChr05g0155031 Helianthus annuus HOM05D008369 ORTHO05D011941 8.8e-07 58.5 91 40.7
HanXRQChr08g0236711 Helianthus annuus HOM05D010063 ORTHO05D011941 1.5e-06 57.8 64 51.6
PGR044G0243 Punica granatum HOM05D008369 ORTHO05D005932 2.6e-06 57.0 111 33.3
Duzib084G1416 Durio zibethinus HOM05D008369 ORTHO05D005932 7.4e-06 55.5 69 39.1
Gohir.D11G035400 Gossypium hirsutum HOM05D008369 ORTHO05D005932 7.4e-06 55.5 69 34.8
Gohir.D12G181600 Gossypium hirsutum HOM05D008369 ORTHO05D005932 7.4e-06 55.5 88 36.4
Lalb_Chr12g0196981 Lupinus albus HOM05D008369 ORTHO05D005932 7.4e-06 55.5 61 41.0


User provided reference genes

Program Settings