Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 2.7e-277 958.0 459 100.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.9e-276 954.5 459 99.6
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 3.2e-275 951.0 459 99.1
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 1.4e-273 945.7 459 98.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.1e-270 936.0 459 97.6
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 1.4e-270 935.6 459 95.2
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 1.4e-270 935.6 459 95.2
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 9.1e-270 932.9 459 95.0
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 2.7e-269 931.4 459 94.8
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 3.5e-269 931.0 459 96.9
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 4.0e-265 917.5 486 90.5
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 6.8e-257 890.2 460 88.5
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.4e-248 861.3 459 85.8
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 1.9e-246 855.5 459 85.6
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 4.1e-246 854.4 459 85.0
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 2.5e-243 845.1 459 84.3
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 7.3e-243 843.6 459 83.9
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.8e-242 841.6 459 83.0
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 2.3e-241 838.6 459 82.4
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 6.8e-241 837.0 475 81.1
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 9.8e-240 833.2 461 82.6
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.9e-238 828.9 459 82.1
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.4e-238 828.6 460 83.0
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 2.4e-238 828.6 461 83.1
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 3.2e-238 828.2 460 82.0
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 3.2e-238 828.2 459 82.4
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 9.2e-238 826.6 460 82.0
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 2.1e-237 825.5 459 81.9
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.5e-237 824.7 461 82.9
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 7.8e-237 823.5 459 81.7
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.1e-236 820.8 461 82.6
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 6.6e-236 820.5 459 81.0
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 8.6e-236 820.1 459 80.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 8.6e-236 820.1 459 81.0
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 1.1e-235 819.7 459 80.8
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 3.3e-235 818.1 459 80.6
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 4.3e-235 817.8 461 81.6
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 5.6e-235 817.4 459 82.6
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 9.5e-235 816.6 460 81.7
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 9.5e-235 816.6 460 81.7
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 1.6e-234 815.8 459 80.6
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 2.8e-234 815.1 460 81.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 1.4e-233 812.8 459 80.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 1.8e-233 812.4 459 80.6
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 1.8e-233 812.4 461 80.9
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.3e-233 812.0 459 80.6
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 8.9e-233 810.1 460 79.1
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 1.2e-232 809.7 481 78.0
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 1.2e-232 809.7 460 81.5
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 7.6e-232 807.0 461 79.2
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 6.4e-231 803.9 460 79.8
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 6.4e-231 803.9 459 81.3
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 8.4e-231 803.5 460 80.7
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 8.4e-231 803.5 459 80.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.9e-230 802.4 459 80.2
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.4e-230 802.0 459 79.7
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 4.1e-230 801.2 460 79.3
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.6e-229 799.3 461 79.4
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 2.7e-229 798.5 458 79.5
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 1.0e-228 796.6 460 79.1
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 1.5e-227 792.7 460 78.5
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 2.5e-227 792.0 459 79.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 1.2e-226 789.6 460 78.3
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 6.2e-226 787.3 460 79.3
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.1e-225 786.6 460 77.8
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 7.6e-224 780.4 459 79.5
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 3.8e-223 778.1 459 77.6
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 1.2e-221 773.1 455 77.8
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.6e-221 772.7 462 76.4
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.1e-221 772.3 460 76.7
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.5e-219 766.1 443 78.1
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 1.6e-218 762.7 460 78.3
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 2.8e-218 761.9 497 72.2
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 8.1e-218 760.4 460 78.3
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.6e-216 755.4 459 77.6
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 4.5e-216 754.6 459 75.4
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 4.5e-216 754.6 458 75.3
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.7e-215 752.7 459 76.3
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.1e-213 745.7 459 75.4
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 7.6e-208 727.2 464 73.3
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 2.1e-205 719.2 460 73.0
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 1.5e-203 713.0 460 70.9
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.9e-199 698.7 498 67.3
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 8.4e-199 697.2 459 71.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.4e-185 652.5 454 67.6
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.0e-183 644.8 458 67.2
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 4.6e-181 638.3 393 74.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.9e-181 637.5 450 64.0
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 4.4e-179 631.7 450 64.2
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 5.3e-177 624.8 456 64.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.3e-175 620.2 340 83.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 8.5e-175 617.5 338 83.4
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 1.9e-174 616.3 462 62.6
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.2e-174 615.5 338 83.4
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.6e-173 612.1 338 83.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 6.3e-170 601.3 338 82.5
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.2e-168 597.0 341 80.9
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.2e-168 597.0 341 80.9
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 7.2e-166 587.8 338 81.7
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.3e-162 577.0 323 81.7
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 8.2e-162 574.3 337 78.3
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 1.8e-161 573.2 461 58.4
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.0e-160 569.7 337 80.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.3e-159 567.0 320 81.6
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-146 523.1 290 82.4
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.2e-146 523.1 304 81.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.7e-143 513.5 337 75.4
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 8.6e-143 511.1 308 80.5
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.4e-139 499.2 291 78.7
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 1.2e-133 480.7 338 65.7
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.6e-133 479.2 277 78.3
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 2.3e-124 449.9 281 74.0
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 6.0e-104 382.1 449 41.2
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 6.4e-90 335.5 486 35.6
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.5e-67 261.2 164 71.3
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 2.4e-52 210.7 163 60.7
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.2e-50 204.1 110 85.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.0e-50 203.0 110 84.5
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 1.5e-38 164.9 98 77.6
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.1e-15 89.0 40 100.0


User provided reference genes

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