Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.3e-304 1048.1 550 100.0
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 9.5e-290 999.6 550 95.3
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 2.3e-288 995.0 550 94.9
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 4.1e-285 984.2 553 93.1
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.2e-279 966.1 553 91.9
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.9e-278 961.4 553 91.3
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 6.0e-276 953.7 550 90.5
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 1.4e-256 889.4 551 85.5
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 5.3e-248 860.9 550 82.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 5.3e-248 860.9 550 82.9
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 6.9e-248 860.5 550 83.1
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 6.9e-248 860.5 550 83.1
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 2.0e-247 859.0 550 82.9
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.7e-236 822.0 566 77.6
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.6e-207 726.5 571 67.8
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-206 722.6 557 68.4
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 9.4e-205 717.2 561 67.6
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.1e-204 716.1 555 67.9
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.1e-204 716.1 557 68.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 4.7e-204 714.9 571 67.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-203 713.8 566 68.2
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-203 713.8 565 68.1
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.8e-203 713.0 557 67.5
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.3e-203 712.6 565 67.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 4.0e-203 711.8 571 66.9
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 5.2e-203 711.4 566 67.0
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 5.2e-203 711.4 559 67.1
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 4.4e-202 708.4 571 66.9
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.5e-202 707.6 570 66.3
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.2e-201 706.1 557 67.3
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 8.3e-201 704.1 567 67.7
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 8.3e-201 704.1 562 67.3
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.2e-199 700.3 571 66.2
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 2.7e-199 699.1 576 65.5
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 4.5e-199 698.4 571 66.2
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.3e-198 696.8 572 65.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 3.8e-198 695.3 570 66.3
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 8.6e-198 694.1 567 64.7
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.5e-197 692.6 560 65.0
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.5e-197 692.6 559 67.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 9.5e-197 690.6 566 64.8
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.2e-196 690.3 553 66.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 2.1e-196 689.5 560 66.6
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.7e-196 688.3 574 64.5
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 4.7e-196 688.3 558 67.0
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 2.6e-194 682.6 564 64.4
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.3e-193 680.2 565 65.8
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.3e-193 680.2 565 64.6
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 2.2e-193 679.5 554 65.3
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 2.8e-193 679.1 567 63.7
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 3.7e-193 678.7 561 65.1
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.1e-192 677.2 574 64.5
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 1.1e-192 677.2 561 64.5
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 1.4e-192 676.8 564 64.0
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.8e-192 676.4 586 62.3
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 3.1e-192 675.6 565 63.7
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 7.0e-192 674.5 562 64.6
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 9.2e-192 674.1 553 66.0
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.0e-191 672.9 565 65.0
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.0e-191 672.9 559 64.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.7e-191 672.5 560 63.4
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.7e-191 672.5 559 64.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 3.5e-191 672.2 568 63.2
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 3.5e-191 672.2 563 64.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.3e-190 670.2 560 64.1
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.3e-190 669.5 562 64.4
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 5.6e-189 664.8 560 64.1
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 2.8e-188 662.5 595 60.8
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 4.7e-188 661.8 574 61.8
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 4.7e-188 661.8 570 61.9
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 8.0e-188 661.0 563 62.7
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.0e-187 660.6 553 64.4
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 6.8e-187 657.9 575 60.3
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 2.0e-186 656.4 565 64.2
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 2.6e-186 656.0 572 62.8
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 7.5e-186 654.4 632 57.6
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.7e-185 652.1 555 62.2
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.2e-184 649.0 563 62.2
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 3.2e-184 649.0 568 62.5
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.3e-182 643.7 575 59.5
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.6e-180 636.7 568 61.6
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 8.9e-179 630.9 559 61.9
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 8.1e-172 607.8 568 59.9
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 4.4e-170 602.1 524 62.6
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 7.1e-168 594.7 565 56.8
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 4.6e-167 592.0 525 62.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 6.0e-167 591.7 556 58.8
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 1.1e-165 587.4 559 58.3
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 1.5e-165 587.0 569 56.4
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 6.2e-164 581.6 562 56.0
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 7.1e-160 568.2 578 54.3
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.3e-158 563.1 630 51.7
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.2e-156 557.4 479 63.0
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 5.8e-154 548.5 509 58.3
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 7.1e-152 541.6 481 60.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 2.1e-143 513.5 401 67.8
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 4.2e-120 436.0 549 44.6
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.8e-118 430.6 445 56.6
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 3.3e-117 426.4 573 41.9
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.6e-103 379.8 407 56.8
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 5.2e-102 375.9 581 38.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 8.5e-97 358.6 549 39.7
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 6.1e-95 352.4 590 36.4
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 4.8e-92 342.8 224 72.3
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.6e-90 337.8 235 71.5
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.1e-83 315.1 291 61.2
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.1e-79 300.8 305 58.4
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.3e-78 297.4 248 66.5
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 4.6e-66 256.5 174 69.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 5.0e-65 253.1 264 52.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 6.6e-57 226.1 376 43.1
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 3.2e-51 207.2 152 71.1
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 5.1e-49 199.9 579 26.4
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 3.2e-43 180.6 193 51.8
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.5e-32 145.2 157 56.1
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 8.1e-31 139.4 149 53.7
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.0e-25 120.9 71 74.6
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.6e-10 72.0 54 70.4
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 7.4e-08 63.2 64 56.2
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 1.6e-07 62.0 40 75.0


User provided reference genes

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