Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G06040 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.3e-55 219.5 112 100.0
AT5G06030 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 1.0e-25 120.2 76 85.5
AL3G47730 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 6.7e-25 117.5 76 82.9
CARHR207370 Cardamine hirsuta HOM05D000256 ORTHO05D000119 1.6e-13 79.7 82 54.9
Thhalv10015541m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 3.0e-09 65.5 79 54.4
AT5G06020 Arabidopsis thaliana HOM05D000256 ORTHO05D000119 4.0e-09 65.1 74 52.7
CARHR207390 Cardamine hirsuta HOM05D000256 ORTHO05D000119 4.4e-08 61.6 76 46.1
AL6G15730 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 5.7e-08 61.2 76 51.3
AL4G15720 Arabidopsis lyrata HOM05D000256 ORTHO05D000119 7.5e-08 60.8 76 50.0
Thhalv10015570m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 7.5e-08 60.8 77 49.4
BraA02t04876Z Brassica rapa HOM05D000256 ORTHO05D000119 9.8e-08 60.5 64 54.7
BolC2t06231H Brassica oleracea HOM05D000256 ORTHO05D000119 3.7e-07 58.5 69 44.9
C02p02650 Brassica napus HOM05D000256 ORTHO05D000119 4.8e-07 58.2 61 49.2
CARHR207380 Cardamine hirsuta HOM05D000256 ORTHO05D000119 5.4e-06 54.7 78 48.7
Carub.0004s0439 Capsella rubella HOM05D000256 ORTHO05D000119 9.1e-06 53.9 59 45.8


User provided reference genes

Program Settings