Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G05020 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 1.2e-77 293.1 155 100.0
CARHR026190 Cardamine hirsuta HOM05D008071 ORTHO05D009954 5.4e-57 224.6 155 74.2
BcaC01g01683 Brassica carinata HOM05D008071 ORTHO05D009954 8.4e-34 147.5 147 50.3
BolC3t19602H Brassica oleracea HOM05D008071 ORTHO05D009954 8.4e-34 147.5 147 50.3
BraA08t34634Z Brassica rapa HOM05D008071 ORTHO05D009954 1.9e-33 146.4 147 50.3
C03p73050 Brassica napus HOM05D008071 ORTHO05D009954 3.0e-31 139.0 147 48.3
Thhalv10009029m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 1.9e-30 136.3 153 46.4
Carub.0001s2523 Capsella rubella HOM05D008071 ORTHO05D009954 5.6e-30 134.8 150 47.3
AL1G40040 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 1.1e-28 130.6 150 44.7
Sp1g22940 Schrenkiella parvula HOM05D008071 ORTHO05D009954 1.8e-28 129.8 153 45.1
BcaB05g24356 Brassica carinata HOM05D008071 ORTHO05D009954 3.4e-27 125.6 143 45.5
C02p24260 Brassica napus HOM05D008071 ORTHO05D009954 3.4e-27 125.6 149 45.0
BraA02t06549Z Brassica rapa HOM05D008071 ORTHO05D009954 3.4e-27 125.6 149 45.0
CARHR026210 Cardamine hirsuta HOM05D008071 ORTHO05D009954 3.4e-27 125.6 152 45.4
Carub.0001s2525 Capsella rubella HOM05D008071 ORTHO05D009954 5.8e-27 124.8 150 46.7
Carub.0006s3123 Capsella rubella HOM05D008071 ORTHO05D009954 5.8e-27 124.8 155 42.6
BcaC03g14931 Brassica carinata HOM05D008071 ORTHO05D009954 1.0e-26 124.0 149 44.3
A07p31290 Brassica napus HOM05D008071 ORTHO05D009954 1.0e-26 124.0 152 44.7
BolC2t08535H Brassica oleracea HOM05D008071 ORTHO05D009954 1.0e-26 124.0 149 44.3
BraA07t30762Z Brassica rapa HOM05D008071 ORTHO05D009954 1.0e-26 124.0 152 44.7
A02p14820 Brassica napus HOM05D008071 ORTHO05D009954 2.9e-26 122.5 149 44.3
Sp5g23220 Schrenkiella parvula HOM05D008071 ORTHO05D009954 1.9e-25 119.8 149 40.9
THA.LOC104827708 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 4.2e-25 118.6 149 41.6
Sp2g26770 Schrenkiella parvula HOM05D008071 ORTHO05D009954 2.7e-24 115.9 129 50.4
A07p12520 Brassica napus HOM05D008071 ORTHO05D009954 1.0e-23 114.0 149 46.3
Carub.0001s2524 Capsella rubella HOM05D008071 ORTHO05D009954 1.0e-23 114.0 150 41.3
Aa31LG7G9180 Aethionema arabicum HOM05D008071 ORTHO05D009954 1.3e-23 113.6 149 43.6
THA.LOC104827706 Tarenaya hassleriana HOM05D008071 ORTHO05D009954 3.9e-23 112.1 157 40.1
BcaB03g12034 Brassica carinata HOM05D008071 ORTHO05D009954 1.1e-22 110.5 151 39.1
CARHR136500 Cardamine hirsuta HOM05D008071 ORTHO05D009954 1.5e-22 110.2 132 46.2
A04p31550 Brassica napus HOM05D008071 ORTHO05D009954 1.9e-22 109.8 150 41.3
BraA04t18611Z Brassica rapa HOM05D008071 ORTHO05D009954 1.9e-22 109.8 150 41.3
BcaB03g14033 Brassica carinata HOM05D008071 ORTHO05D009954 2.5e-22 109.4 137 48.2
BolC4t28398H Brassica oleracea HOM05D008071 ORTHO05D009954 3.3e-22 109.0 150 41.3
C04p68980 Brassica napus HOM05D008071 ORTHO05D009954 9.6e-22 107.5 150 41.3
Thhalv10009039m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 1.3e-21 107.1 150 44.7
BcaB03g14030 Brassica carinata HOM05D008071 ORTHO05D009954 4.8e-21 105.1 131 48.1
BraA09t39418Z Brassica rapa HOM05D008071 ORTHO05D009954 6.2e-21 104.8 146 42.5
AL4G39460 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 8.2e-21 104.4 152 42.1
AT2G41390 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 8.2e-21 104.4 152 41.4
A09p39180 Brassica napus HOM05D008071 ORTHO05D009954 1.8e-20 103.2 146 41.8
BcaB03g12032 Brassica carinata HOM05D008071 ORTHO05D009954 2.4e-20 102.8 143 42.0
C05p25190 Brassica napus HOM05D008071 ORTHO05D009954 5.3e-20 101.7 146 40.4
BcaC02g12899 Brassica carinata HOM05D008071 ORTHO05D009954 2.6e-19 99.4 153 37.3
C03p73100 Brassica napus HOM05D008071 ORTHO05D009954 1.3e-18 97.1 144 38.9
BolC3t19605H Brassica oleracea HOM05D008071 ORTHO05D009954 1.3e-18 97.1 144 38.9
AT2G41400 Arabidopsis thaliana HOM05D008071 ORTHO05D009954 2.9e-18 95.9 127 42.5
BraA07t29031Z Brassica rapa HOM05D008071 ORTHO05D009954 3.8e-18 95.5 130 43.8
A08p26850 Brassica napus HOM05D008071 ORTHO05D009954 3.2e-17 92.4 145 38.6
BcaC08g45854 Brassica carinata HOM05D008071 ORTHO05D009954 1.1e-14 84.0 152 38.8
Rhsim03G0040600 Rhododendron simsii HOM05D008071 ORTHO05D009954 3.7e-13 79.0 126 34.1
BcaB03g15516 Brassica carinata HOM05D008071 ORTHO05D009954 8.2e-13 77.8 152 34.9
BcaC06g35221 Brassica carinata HOM05D008071 ORTHO05D009954 1.3e-10 70.5 104 39.4
C07p18520 Brassica napus HOM05D008071 ORTHO05D009954 1.3e-10 70.5 104 39.4
QL07p015274 Quercus lobata HOM05D008071 ORTHO05D009954 1.3e-10 70.5 121 32.2
BolC7t42363H Brassica oleracea HOM05D008071 ORTHO05D009954 2.9e-10 69.3 104 38.5
Dinv06965 Davidia involucrata HOM05D008071 ORTHO05D009954 2.9e-10 69.3 119 31.9
AL2G27010 Arabidopsis lyrata HOM05D008071 ORTHO05D009954 1.9e-09 66.6 76 44.7
BcaB03g14032 Brassica carinata HOM05D008071 ORTHO05D009954 4.2e-09 65.5 71 49.3
BcaC05g26476 Brassica carinata HOM05D008071 ORTHO05D009954 5.5e-09 65.1 94 42.6
ATR0006G003 Amborella trichopoda HOM05D008071 ORTHO05D009954 7.9e-08 61.2 115 33.0
Thhalv10009714m.g Eutrema salsugineum HOM05D008071 ORTHO05D009954 7.9e-08 61.2 81 44.4
BolC5t31253H Brassica oleracea HOM05D008071 ORTHO05D009954 1.8e-07 60.1 146 32.9
MBI13_g01662_MAGBIO Magnolia biondii HOM05D008071 ORTHO05D009954 2.0e-06 56.6 133 29.3
CANSAT78G1840 Cannabis sativa HOM05D008071 ORTHO05D009954 2.5e-06 56.2 139 29.5
Solyc09g072770.1 Solanum lycopersicum HOM05D013183 ORTHO05D018130 7.4e-06 54.7 108 33.3


User provided reference genes

Program Settings