Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 7.4e-116 420.6 223 100.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 6.7e-109 397.5 221 95.9
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 3.6e-102 375.2 223 89.2
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.1e-100 370.2 223 89.7
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.7e-99 366.3 223 89.7
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 7.7e-97 357.5 223 86.5
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.1e-95 353.6 224 85.7
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.5e-95 353.2 224 85.3
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 2.5e-95 352.4 224 85.3
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 1.2e-94 350.1 224 85.3
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 1.0e-85 320.5 221 78.3
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 1.8e-85 319.7 224 76.8
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.2e-75 286.2 220 68.6
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 4.9e-75 285.0 220 68.6
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 6.3e-75 284.6 219 68.0
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.4e-74 283.5 220 68.2
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 2.4e-74 282.7 220 67.3
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 4.1e-74 282.0 218 67.0
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 4.5e-73 278.5 220 65.9
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.7e-72 276.6 223 66.4
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 6.6e-72 274.6 166 87.3
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 6.6e-72 274.6 220 66.4
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 8.6e-72 274.2 220 65.5
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 1.9e-71 273.1 219 63.9
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 1.9e-71 273.1 220 65.9
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 7.3e-71 271.2 235 64.3
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 6.1e-70 268.1 219 64.8
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 6.1e-70 268.1 206 68.0
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 8.0e-70 267.7 219 64.8
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 8.0e-70 267.7 183 73.2
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.3e-69 266.2 220 63.2
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 2.3e-69 266.2 217 63.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 2.6e-68 262.7 225 66.2
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 3.4e-68 262.3 168 76.8
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 3.4e-68 262.3 243 60.5
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 1.3e-67 260.4 220 64.5
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 2.2e-67 259.6 219 62.6
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.2e-67 259.6 231 61.9
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 2.9e-67 259.2 209 64.1
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 8.3e-67 257.7 221 62.4
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 8.3e-67 257.7 182 70.9
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.1e-66 257.3 219 62.6
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.8e-66 256.5 219 61.2
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 5.4e-66 255.0 219 60.7
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 7.0e-66 254.6 217 61.3
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 9.2e-66 254.2 217 61.3
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 9.2e-66 254.2 183 68.9
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 9.2e-66 254.2 228 61.8
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 5.9e-65 251.5 177 70.1
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 5.9e-65 251.5 220 60.0
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 1.3e-64 250.4 219 59.8
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 2.3e-64 249.6 217 60.8
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.3e-64 249.6 247 56.7
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 2.3e-64 249.6 219 60.7
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 3.9e-64 248.8 224 58.5
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.0e-64 248.4 160 78.1
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 8.6e-64 247.7 223 59.6
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.5e-63 246.1 156 78.8
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 4.3e-63 245.4 229 58.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 4.3e-63 245.4 220 60.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 5.6e-63 245.0 220 60.5
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 9.5e-63 244.2 221 59.7
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.2e-62 243.8 170 74.7
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 1.2e-62 243.8 156 76.9
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 2.1e-62 243.0 220 60.5
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.8e-62 242.7 217 60.8
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 8.0e-62 241.1 220 58.6
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 5.2e-61 238.4 221 57.0
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 5.2e-61 238.4 230 56.5
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 6.8e-61 238.0 299 48.5
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 8.9e-61 237.7 182 64.3
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 4.4e-60 235.3 216 57.4
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 5.8e-60 235.0 176 67.0
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 1.7e-59 233.4 179 65.4
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 1.7e-59 233.4 204 58.8
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.2e-59 233.0 176 66.5
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 3.7e-59 232.3 210 60.0
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 4.9e-59 231.9 204 58.3
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.1e-58 230.7 182 63.2
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.2e-57 227.3 153 73.9
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.2e-57 227.3 217 56.2
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.0e-57 226.5 152 73.0
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.3e-56 223.0 149 75.8
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.5e-55 220.3 227 56.4
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.3e-55 218.0 153 71.2
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.2e-54 217.2 191 59.7
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 2.8e-54 216.1 221 55.7
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 4.7e-54 215.3 176 63.1
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 6.2e-54 214.9 153 69.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.1e-53 214.2 160 65.0
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 3.1e-53 212.6 150 69.3
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 3.4e-52 209.1 192 58.3
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 7.5e-52 208.0 149 67.8
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 5.4e-50 201.8 148 66.2
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.5e-49 199.1 223 53.8
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.0e-48 197.6 155 62.6
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 2.2e-43 179.9 122 73.8
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 8.4e-43 177.9 174 52.3
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.1e-42 177.6 183 54.6
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 3.2e-42 176.0 147 59.2
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 5.4e-42 175.3 90 98.9
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 6.2e-38 161.8 209 48.8
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 5.2e-37 158.7 193 45.1
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 3.2e-34 149.4 146 59.6
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 3.0e-32 142.9 175 46.3
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 9.6e-31 137.9 86 76.7
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 6.2e-30 135.2 79 79.7
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.2e-28 131.0 180 42.2
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.8e-27 125.9 137 52.6
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 6.4e-27 125.2 129 53.5
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 3.2e-26 122.9 67 89.6
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.5e-23 114.0 170 41.2
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.3e-22 110.9 72 75.0
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 4.2e-18 95.9 80 61.2
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 5.5e-18 95.5 240 29.6
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.9e-16 89.4 72 65.3
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 3.7e-14 82.8 59 69.5
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 4.9e-11 72.4 107 44.9
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 5.5e-10 68.9 62 61.3
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.1e-10 68.6 108 37.0
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 9.3e-10 68.2 83 54.2
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.6e-09 67.4 64 50.0


User provided reference genes

Program Settings