Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G03780 Arabidopsis thaliana HOM05D010575 ORTHO05D001927 5.1e-188 661.0 352 100.0
AL6G13330 Arabidopsis lyrata HOM05D010575 ORTHO05D001927 1.3e-122 443.7 381 71.1
Carub.0006s0269 Capsella rubella HOM05D010575 ORTHO05D001927 3.5e-112 409.1 405 62.7
CARHR209510 Cardamine hirsuta HOM05D010575 ORTHO05D001927 3.4e-75 286.2 351 53.8
Sp2g18670 Schrenkiella parvula HOM05D010575 ORTHO05D001927 3.3e-70 269.6 386 51.3
C09p04690 Brassica napus HOM05D010575 ORTHO05D001927 4.7e-64 249.2 375 47.7
Thhalv10004420m.g Eutrema salsugineum HOM05D010575 ORTHO05D001927 1.0e-63 248.1 344 49.1
BraA09t36075Z Brassica rapa HOM05D010575 ORTHO05D001927 1.1e-62 244.6 360 48.9
BcaC04g23783 Brassica carinata HOM05D010575 ORTHO05D001927 2.6e-62 243.4 381 47.2
A09p04380 Brassica napus HOM05D010575 ORTHO05D001927 9.7e-62 241.5 360 48.3
BolC9t53397H Brassica oleracea HOM05D010575 ORTHO05D001927 4.8e-61 239.2 378 46.6
BcaB04g19570 Brassica carinata HOM05D010575 ORTHO05D001927 1.4e-55 221.1 394 42.6
CARHR209520 Cardamine hirsuta HOM05D010575 ORTHO05D001927 5.0e-50 202.6 345 45.2
Sp5g00980 Schrenkiella parvula HOM05D010575 ORTHO05D001927 7.5e-46 188.7 356 41.6
C07p39090 Brassica napus HOM05D001083 ORTHO05D001637 8.0e-40 168.7 312 40.1
A06p39250 Brassica napus HOM05D001083 ORTHO05D001637 5.2e-39 166.0 306 40.2
BraA06t26839Z Brassica rapa HOM05D001083 ORTHO05D001637 2.6e-38 163.7 336 37.5
BolC7t44427H Brassica oleracea HOM05D001083 ORTHO05D001637 5.7e-38 162.5 312 39.1
BcaC06g30810 Brassica carinata HOM05D001083 ORTHO05D001637 9.5e-33 145.2 324 35.5
BcaB01g05861 Brassica carinata HOM05D010575 ORTHO05D001927 3.7e-29 133.3 229 42.8
THA.LOC104822447 Tarenaya hassleriana HOM05D010575 ORTHO05D001927 1.8e-28 131.0 486 29.8
C03p01300 Brassica napus HOM05D010575 ORTHO05D001927 1.5e-25 121.3 192 41.7
BolC3t12689H Brassica oleracea HOM05D010575 ORTHO05D001927 1.5e-25 121.3 192 41.7
AL1G11350 Arabidopsis lyrata HOM05D010575 ORTHO05D001927 8.1e-16 89.0 142 38.0
AT1G01150 Arabidopsis thaliana HOM05D002477 ORTHO05D031469 8.3e-13 79.0 143 35.7
BcaC05g25588 Brassica carinata HOM05D002477 ORTHO05D001927 4.0e-07 60.1 106 34.9
C05p14440 Brassica napus HOM05D002477 ORTHO05D001927 4.0e-07 60.1 106 34.9
BcaB02g06607 Brassica carinata HOM05D002477 ORTHO05D001927 2.0e-06 57.8 78 37.2
BolC5t30170H Brassica oleracea HOM05D002477 ORTHO05D001927 3.4e-06 57.0 78 37.2
AL9U12160 Arabidopsis lyrata HOM05D021191 ORTHO05D001927 4.4e-06 56.6 132 29.5
A06p12200 Brassica napus HOM05D002477 ORTHO05D001927 7.6e-06 55.8 78 35.9
BraA06t24388Z Brassica rapa HOM05D002477 ORTHO05D001927 7.6e-06 55.8 78 35.9
A03p01010 Brassica napus HOM05D010575 ORTHO05D001927 9.9e-06 55.5 47 55.3
CARHR001320 Cardamine hirsuta HOM05D002477 ORTHO05D001927 9.9e-06 55.5 167 26.9


User provided reference genes

Program Settings