Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G03210 Arabidopsis thaliana HOM05D011718 ORTHO05D013955 8.9e-44 179.9 90 100.0
AL6G12500 Arabidopsis lyrata HOM05D011718 ORTHO05D013955 2.4e-25 118.6 66 89.4
CARHR210140 Cardamine hirsuta HOM05D011718 ORTHO05D013955 1.5e-22 109.4 64 84.4
Carub.0006s0200 Capsella rubella HOM05D011718 ORTHO05D013955 3.6e-21 104.8 66 80.3
C09p73550 Brassica napus HOM05D004349 ORTHO05D005097 7.6e-19 97.1 74 71.6
BraA03t09489Z Brassica rapa HOM05D011718 ORTHO05D013955 1.7e-18 95.9 79 60.8
BcaC06g32043 Brassica carinata HOM05D011718 ORTHO05D013955 4.2e-17 91.3 64 75.0
BolC9t60087H Brassica oleracea HOM05D011718 ORTHO05D013955 4.2e-17 91.3 64 75.0
A03p01070 Brassica napus HOM05D011718 ORTHO05D013955 2.1e-16 89.0 64 68.8
BolC3t12696H Brassica oleracea HOM05D011718 ORTHO05D013955 2.1e-16 89.0 64 68.8
C09p73560 Brassica napus HOM05D011718 ORTHO05D013955 3.5e-16 88.2 69 65.2
C03p01380 Brassica napus HOM05D011718 ORTHO05D013955 4.6e-16 87.8 64 67.2
BolC9t60088H Brassica oleracea HOM05D011718 ORTHO05D013955 1.3e-15 86.3 66 66.7
A10p32720 Brassica napus HOM05D011718 ORTHO05D013955 8.7e-15 83.6 66 65.2
C02p00910 Brassica napus HOM05D004349 ORTHO05D005097 1.1e-12 76.6 58 65.5
BraA02t04750Z Brassica rapa HOM05D004349 ORTHO05D005097 3.1e-12 75.1 59 66.1
BolC2t06088H Brassica oleracea HOM05D011718 ORTHO05D013955 4.0e-12 74.7 57 64.9
BraA10t45308Z Brassica rapa HOM05D004349 ORTHO05D005097 2.0e-11 72.4 75 54.7
A10p32710 Brassica napus HOM05D004349 ORTHO05D005097 3.4e-11 71.6 48 75.0
Aa31LG1G21880 Aethionema arabicum HOM05D011718 ORTHO05D013955 7.8e-08 60.5 45 64.4


User provided reference genes

Program Settings