Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 3.1e-79 298.9 215 100.0
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 1.7e-72 276.6 215 92.1
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 4.9e-56 221.9 217 78.8
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 1.0e-53 214.2 222 77.5
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 2.2e-48 196.4 219 76.7
Sp6g39810 Schrenkiella parvula HOM05D010138 ORTHO05D006998 3.2e-47 192.6 221 72.9
BcaB05g21871 Brassica carinata HOM05D010138 ORTHO05D006998 1.4e-42 177.2 225 68.4
Aa31LG1G22120 Aethionema arabicum HOM05D010138 ORTHO05D006998 6.0e-38 161.8 220 65.5
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 2.1e-27 126.7 216 58.3
BolC9t60125H Brassica oleracea HOM05D010138 ORTHO05D006998 7.1e-23 111.7 214 61.7
A10p32940 Brassica napus HOM05D010138 ORTHO05D006998 9.3e-23 111.3 134 62.7
BraA10t45331Z Brassica rapa HOM05D010138 ORTHO05D006998 9.3e-23 111.3 134 62.7
C09p73910 Brassica napus HOM05D010138 ORTHO05D006998 4.6e-22 109.0 216 58.3
BcaNung03275 Brassica carinata HOM05D010138 ORTHO05D006998 3.9e-21 105.9 213 56.3
BraA02t04729Z Brassica rapa HOM05D010138 ORTHO05D006998 1.5e-20 104.0 217 55.3
BcaC03g13046 Brassica carinata HOM05D010138 ORTHO05D006998 7.3e-20 101.7 216 54.6
C02p00640 Brassica napus HOM05D010138 ORTHO05D006998 7.3e-20 101.7 128 57.8
BolC2t06059H Brassica oleracea HOM05D010138 ORTHO05D006998 7.3e-20 101.7 216 54.6
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 2.2e-16 90.1 64 78.1
BcaC09g49216 Brassica carinata HOM05D010138 ORTHO05D006998 1.3e-13 80.9 72 65.3
C01p41300 Brassica napus HOM05D010138 ORTHO05D006998 1.3e-13 80.9 72 65.3
C07p29060 Brassica napus HOM05D001366 ORTHO05D008529 1.3e-13 80.9 64 71.9
BolC1t04090H Brassica oleracea HOM05D010138 ORTHO05D006998 1.3e-13 80.9 72 65.3
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.1e-13 79.0 118 50.0
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 6.7e-13 78.6 127 45.7
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 8.7e-13 78.2 140 44.3
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 8.7e-13 78.2 114 46.5
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.5e-12 77.4 118 49.2
C08p37600 Brassica napus HOM05D000736 ORTHO05D017680 2.5e-12 76.6 57 75.4
BolC1t02963H Brassica oleracea HOM05D000736 ORTHO05D017680 2.5e-12 76.6 57 75.4
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.3e-12 76.3 120 48.3
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 3.3e-12 76.3 137 47.4
Prupe.6G244900 Prunus persica HOM05D007476 ORTHO05D006998 3.3e-12 76.3 117 47.0
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 4.3e-12 75.9 74 60.8
BcaC09g50000 Brassica carinata HOM05D034825 ORTHO05D032742 5.6e-12 75.5 57 73.7
C01p30220 Brassica napus HOM05D000736 ORTHO05D017680 5.6e-12 75.5 57 73.7
BraA01t01586Z Brassica rapa HOM05D000736 ORTHO05D017680 1.6e-11 73.9 56 73.2
A02p02510 Brassica napus HOM05D000736 ORTHO05D017680 2.1e-11 73.6 56 73.2
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 6.2e-11 72.0 77 55.8
RcHm_v2.0_Chr3g0468131 Rosa chinensis HOM05D007476 ORTHO05D006998 1.1e-10 71.2 77 54.5
BcaC06g34403 Brassica carinata HOM05D001366 ORTHO05D003220 5.3e-10 68.9 45 86.7
Haze_20680 Corylus avellana HOM05D007476 ORTHO05D006998 1.5e-09 67.4 125 41.6
QL07p045831 Quercus lobata HOM05D007476 ORTHO05D006998 2.0e-09 67.0 57 61.4
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 2.0e-09 67.0 138 42.0
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 2.6e-09 66.6 77 53.2
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 2.6e-09 66.6 77 50.6
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 3.4e-09 66.2 71 57.7
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 3.4e-09 66.2 126 41.3
BcaC06g31353 Brassica carinata HOM05D010138 ORTHO05D006998 4.5e-09 65.9 54 66.7
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 1.7e-08 63.9 87 60.9
Ah.08g212030 Amaranthus hybridus HOM05D007476 ORTHO05D006998 3.8e-08 62.8 116 43.1
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 3.8e-08 62.8 111 41.4
Cfa017474 Carpinus fangiana HOM05D007476 ORTHO05D006998 8.4e-08 61.6 135 37.0
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 8.4e-08 61.6 48 68.8
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 8.4e-08 61.6 118 39.0
Gohir.D09G156000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 1.4e-07 60.8 91 45.1
Duzib128G0759 Durio zibethinus HOM05D007476 ORTHO05D006998 2.4e-07 60.1 73 52.1
CDE09G0878 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 3.2e-07 59.7 46 65.2
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 3.2e-07 59.7 76 51.3
CiPaw.09G184800 Carya illinoinensis HOM05D007476 ORTHO05D006998 4.2e-07 59.3 140 37.1
Nn2g12939 Nelumbo nucifera HOM05D007476 ORTHO05D006998 4.2e-07 59.3 92 42.4
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 4.2e-07 59.3 75 53.3
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 9.3e-07 58.2 79 58.2
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 1.2e-06 57.8 34 82.4
Actinidia13115 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.6e-06 57.4 77 46.8
MD04G1111200 Malus domestica HOM05D007476 ORTHO05D006998 2.1e-06 57.0 42 69.0
Hund12067 Selenicereus undatus HOM05D007476 ORTHO05D006998 2.7e-06 56.6 120 36.7
Migut.L01648 Erythranthe guttata HOM05D020465 ORTHO05D006998 3.5e-06 56.2 96 37.5
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 3.5e-06 56.2 111 44.1
Gohir.A13G076000 Gossypium hirsutum HOM05D007476 ORTHO05D006998 7.9e-06 55.1 132 40.2
TWI53G1272 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 7.9e-06 55.1 98 43.9


User provided reference genes

Program Settings