Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G02410 Arabidopsis thaliana HOM05D005843 ORTHO05D007781 1.2e-281 972.6 510 100.0
AL6G11640 Arabidopsis lyrata HOM05D005843 ORTHO05D007781 2.1e-254 882.1 494 89.7
Carub.0006s0120 Capsella rubella HOM05D005843 ORTHO05D007781 7.1e-247 857.1 512 84.0
BolC9t60149H Brassica oleracea HOM05D005843 ORTHO05D007781 8.6e-245 850.1 510 83.9
BcaNung02129 Brassica carinata HOM05D005843 ORTHO05D007781 1.6e-243 845.9 508 83.9
Sp6g40070 Schrenkiella parvula HOM05D005843 ORTHO05D007781 1.1e-242 843.2 510 83.7
Thhalv10013300m.g Eutrema salsugineum HOM05D005843 ORTHO05D007781 1.4e-242 842.8 510 82.7
A10p33250 Brassica napus HOM05D005843 ORTHO05D007781 1.8e-242 842.4 511 83.0
CARHR211000 Cardamine hirsuta HOM05D005843 ORTHO05D007781 2.4e-239 832.0 510 81.6
BcaNung05922 Brassica carinata HOM05D005843 ORTHO05D007781 9.6e-236 820.1 511 81.0
BcaC06g31988 Brassica carinata HOM05D005843 ORTHO05D007781 7.6e-233 810.4 513 81.3
A03p00670 Brassica napus HOM05D005843 ORTHO05D007781 3.8e-232 808.1 511 80.8
C03p00940 Brassica napus HOM05D005843 ORTHO05D007781 4.2e-231 804.7 508 81.1
BolC3t12656H Brassica oleracea HOM05D005843 ORTHO05D007781 4.2e-231 804.7 508 81.1
BraA03t09456Z Brassica rapa HOM05D005843 ORTHO05D007781 7.9e-230 800.4 521 79.1
BcaB01g06160 Brassica carinata HOM05D005843 ORTHO05D007781 1.8e-229 799.3 508 80.3
C09p74160 Brassica napus HOM05D005843 ORTHO05D007781 6.9e-226 787.3 479 83.1
Aa31LG1G22390 Aethionema arabicum HOM05D005843 ORTHO05D007781 1.8e-218 762.7 581 70.1
THA.LOC104809903 Tarenaya hassleriana HOM05D005843 ORTHO05D007781 3.4e-201 705.3 512 71.7
Atru.chr8.1969 Acer truncatum HOM05D005843 ORTHO05D007781 6.1e-182 641.3 514 63.0
Thecc.05G040300 Theobroma cacao HOM05D005843 ORTHO05D007781 1.2e-177 627.1 514 62.6
GSVIVG01034179001 Vitis vinifera HOM05D005843 ORTHO05D007781 1.3e-176 623.6 514 60.9
Duzib128G1977 Durio zibethinus HOM05D005843 ORTHO05D007781 4.2e-175 618.6 532 60.3
Gohir.A09G156300 Gossypium hirsutum HOM05D005843 ORTHO05D007781 2.7e-174 615.9 514 59.7
Cpa.g.sc332.7 Carica papaya HOM05D005843 ORTHO05D007781 6.1e-174 614.8 511 61.6
Hma1.2p1_1513F.1_g288040 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.4e-173 613.6 514 59.7
Haze_20785 Corylus avellana HOM05D005843 ORTHO05D007781 3.0e-173 612.5 528 59.5
Gohir.D09G151700 Gossypium hirsutum HOM05D005843 ORTHO05D007781 4.0e-173 612.1 514 59.7
Gorai.006G173000 Gossypium raimondii HOM05D005843 ORTHO05D007781 4.0e-173 612.1 514 59.7
CiPaw.09G192200 Carya illinoinensis HOM05D005843 ORTHO05D007781 8.8e-173 610.9 514 59.3
QL06p005681 Quercus lobata HOM05D005843 ORTHO05D007781 2.8e-171 605.9 513 60.2
Oeu024347.1 Olea europaea HOM05D005843 ORTHO05D007781 1.4e-170 603.6 514 58.6
Manes.17G047400 Manihot esculenta HOM05D005843 ORTHO05D007781 2.4e-170 602.8 514 59.9
Eucgr.K03141 Eucalyptus grandis HOM05D005843 ORTHO05D007781 3.1e-170 602.4 513 59.1
ECA238G1173 Erigeron canadensis HOM05D005843 ORTHO05D007781 1.2e-169 600.5 512 57.6
RcHm_v2.0_Chr3g0466751 Rosa chinensis HOM05D005843 ORTHO05D007781 1.6e-169 600.1 512 60.2
Medtr7g060680 Medicago truncatula HOM05D005843 ORTHO05D007781 2.7e-169 599.4 514 59.7
PSO339G2649 Papaver somniferum HOM05D005843 ORTHO05D007781 2.7e-169 599.4 516 60.1
MD12G1140900 Malus domestica HOM05D005843 ORTHO05D007781 1.0e-168 597.4 511 59.5
MELO3C003129.2 Cucumis melo HOM05D005843 ORTHO05D007781 1.3e-168 597.0 514 58.6
Sc20g0004950 Simmondsia chinensis HOM05D005843 ORTHO05D007781 1.3e-168 597.0 514 57.8
TWI38G1602 Tripterygium wilfordii HOM05D005843 ORTHO05D007781 1.7e-168 596.7 512 59.0
TAR633G1568 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.3e-168 596.3 515 59.0
FAN14G2296 Fragaria x ananassa HOM05D005843 ORTHO05D007781 6.5e-168 594.7 511 59.3
DCAR_014847 Daucus carota HOM05D005843 ORTHO05D007781 1.1e-167 594.0 516 58.5
FAN05G5617 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.9e-167 593.2 511 58.7
Lj3C968G10 Lonicera japonica HOM05D005843 ORTHO05D007781 1.9e-167 593.2 552 56.7
TPR.G23290 Trifolium pratense HOM05D005843 ORTHO05D007781 1.9e-167 593.2 511 59.7
PSO151G0180 Papaver somniferum HOM05D005843 ORTHO05D007781 4.2e-167 592.0 515 58.3
Prupe.6G254200 Prunus persica HOM05D005843 ORTHO05D007781 4.2e-167 592.0 514 60.7
Ca_26026_v3 Cicer arietinum L. HOM05D005843 ORTHO05D007781 1.6e-166 590.1 513 59.6
CsaV3_4G024980 Cucumis sativus L. HOM05D005843 ORTHO05D007781 1.6e-166 590.1 513 58.1
Cc06_g02690 Coffea canephora HOM05D005843 ORTHO05D007781 3.0e-165 585.9 517 57.6
Rhsim05G0192300 Rhododendron simsii HOM05D005843 ORTHO05D007781 5.2e-165 585.1 515 58.3
Nitab4.5_0001190g0070 Nicotiana tabacum HOM05D005843 ORTHO05D007781 6.8e-165 584.7 517 58.6
Lalb_Chr19g0125371 Lupinus albus HOM05D005843 ORTHO05D007781 8.9e-165 584.3 513 58.7
QL11p021821 Quercus lobata HOM05D005843 ORTHO05D007781 1.2e-164 583.9 555 54.4
MD04G1127500 Malus domestica HOM05D005843 ORTHO05D007781 4.4e-164 582.0 510 57.6
CANSAT35G1785 Cannabis sativa HOM05D005843 ORTHO05D007781 9.8e-164 580.9 525 57.9
Glyma.07G131100 Glycine max HOM05D005843 ORTHO05D007781 9.8e-164 580.9 513 56.9
CAN.G326.14 Capsicum annuum HOM05D005843 ORTHO05D007781 1.3e-163 580.5 515 56.7
PGR004G0455 Punica granatum HOM05D005843 ORTHO05D007781 3.7e-163 578.9 514 58.4
ClCG04G008190 Citrullus lanatus HOM05D005843 ORTHO05D007781 1.4e-162 577.0 513 58.5
PGSC0003DMG400008911 Solanum tuberosum HOM05D005843 ORTHO05D007781 5.4e-162 575.1 518 57.1
Hund24578 Selenicereus undatus HOM05D005843 ORTHO05D007781 2.0e-161 573.2 514 56.4
Sopen09g005490 Solanum pennellii HOM05D005843 ORTHO05D007781 2.0e-161 573.2 518 56.4
arahy.Tifrunner.gnm1.ann1.JAB43P Arachis hypogaea HOM05D005843 ORTHO05D007781 4.5e-161 572.0 515 57.9
Sed0019468 Sechium edule HOM05D005843 ORTHO05D007781 5.9e-161 571.6 486 59.5
Psat5g101400 Pisum sativum HOM05D005843 ORTHO05D007781 7.8e-161 571.2 513 57.9
VMungo1383G2898 Vigna mungo HOM05D005843 ORTHO05D007781 1.3e-160 570.5 513 57.1
Migut.J00332 Erythranthe guttata HOM05D005843 ORTHO05D007781 2.3e-160 569.7 522 57.1
SalBow3G1829 Salvia bowleyana HOM05D005843 ORTHO05D007781 3.8e-160 568.9 520 54.8
Nn8g39667 Nelumbo nucifera HOM05D005843 ORTHO05D007781 6.6e-160 568.2 521 56.0
EL10Ac3g07255 Beta vulgaris HOM05D005843 ORTHO05D007781 1.4e-157 560.5 515 56.5
Peaxi162Scf00165g01322 Petunia axillaris HOM05D005843 ORTHO05D007781 1.4e-157 560.5 557 53.3
Lsat_1_v5_gn_2_17401 Lactuca sativa HOM05D005843 ORTHO05D007781 1.8e-157 560.1 505 55.0
Phvul.008G100900 Phaseolus vulgaris HOM05D005843 ORTHO05D007781 3.0e-157 559.3 513 56.5
Aqoxy6G01388 Aquilegia oxysepala HOM05D005843 ORTHO05D007781 5.2e-157 558.5 515 56.5
SGA_v2.0_scaffold75G24948 Striga asiatica HOM05D005843 ORTHO05D007781 1.2e-156 557.4 514 56.6
HanXRQChr16g0515781 Helianthus annuus HOM05D005843 ORTHO05D007781 2.6e-156 556.2 495 56.4
Solyc09g010770.3 Solanum lycopersicum HOM05D005843 ORTHO05D007781 4.9e-155 552.0 511 54.8
FAN02G2362 Fragaria x ananassa HOM05D005843 ORTHO05D007781 1.6e-153 547.0 542 54.1
FAN09G3893 Fragaria x ananassa HOM05D005843 ORTHO05D007781 2.3e-152 543.1 521 55.5
Hma1.2p1_1513F.1_g288030 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 8.9e-149 531.2 465 58.5
CSS0035027 Camellia sinensis var. sinensis HOM05D005843 ORTHO05D007781 1.5e-148 530.4 464 59.9
HPP92_000805 Vanilla planifolia HOM05D005843 ORTHO05D007781 3.2e-146 522.7 515 52.4
Actinidia26464 Actinidia chinensis HOM05D005843 ORTHO05D000250 2.3e-144 516.5 440 60.7
Dinv35609 Davidia involucrata HOM05D005843 ORTHO05D007781 1.8e-141 506.9 429 60.1
Glyma.18G179500 Glycine max HOM05D005843 ORTHO05D007781 3.1e-141 506.1 513 52.2
AUR62030297 Chenopodium quinoa HOM05D005843 ORTHO05D007781 4.0e-141 505.8 594 48.3
SHI00339 Sapria himalayana HOM05D005843 ORTHO05D007781 5.2e-141 505.4 536 50.0
Sabra06G0064400 Salix brachista HOM05D005843 ORTHO05D007781 1.0e-136 491.1 516 52.9
Lj3g0024665 Lotus japonicus HOM05D005843 ORTHO05D007781 1.2e-129 467.6 458 54.4
unitig_26.g9195 Utricularia gibba HOM05D005843 ORTHO05D007781 4.3e-127 459.1 461 53.4
AUR62015928 Chenopodium quinoa HOM05D005843 ORTHO05D007781 7.3e-127 458.4 512 50.2
Pp3c4_12410 Physcomitrium patens HOM05D005843 ORTHO05D007781 6.9e-125 451.8 522 47.9
Os04g0503700 Oryza sativa ssp. japonica HOM05D005843 ORTHO05D007781 1.3e-120 437.6 472 48.7
BcaC06g31987 Brassica carinata HOM05D005843 ORTHO05D007781 3.5e-113 412.9 318 70.8
arahy.Tifrunner.gnm1.ann1.HAEF8J Arachis hypogaea HOM05D005843 ORTHO05D007781 7.9e-113 411.8 387 56.3
FvH4_6g13910 Fragaria vesca HOM05D005843 ORTHO05D007781 6.7e-112 408.7 374 57.8
SMO137G0039 Selaginella moellendorffii HOM05D005843 ORTHO05D007781 4.6e-105 386.0 527 41.4
Mapoly0047s0019 Marchantia polymorpha HOM05D005843 ORTHO05D007781 2.9e-99 366.7 531 41.6
Dinv37176 Davidia involucrata HOM05D005843 ORTHO05D007781 1.4e-98 364.4 340 55.3
BcaNung05921 Brassica carinata HOM05D002515 ORTHO05D002722 1.6e-97 360.9 373 56.0
A03p00710 Brassica napus HOM05D005843 ORTHO05D007781 4.8e-94 349.4 196 89.8
AUR62018365 Chenopodium quinoa HOM05D005843 ORTHO05D007781 1.2e-92 344.7 378 50.8
ATR0585G056 Amborella trichopoda HOM05D005843 ORTHO05D007781 2.3e-88 330.5 387 45.2
vmacro20152 Vaccinium macrocarpon HOM05D005843 ORTHO05D007781 3.3e-87 326.6 440 45.5
CDE09G0345 Ceratophyllum demersum HOM05D005843 ORTHO05D007781 3.1e-85 320.1 458 42.4
Potri.006G084800 Populus trichocarpa HOM05D005843 ORTHO05D007781 2.5e-82 310.5 327 52.9
Zm00001eb078080 Zea mays HOM05D005843 ORTHO05D007781 7.7e-76 288.9 339 44.5
Nitab4.5_0002018g0090 Nicotiana tabacum HOM05D005843 ORTHO05D007781 1.1e-74 285.0 263 57.8
SGA_v2.0_scaffold75G24944 Striga asiatica HOM05D005843 ORTHO05D007781 4.5e-68 263.1 425 39.8
AagrBONN_evm.TU.Sc2ySwM_117.1914 Anthoceros agrestis HOM05D005843 ORTHO05D007781 1.7e-67 261.2 453 36.0
CBR_g29861 Chara braunii HOM05D005843 ORTHO05D000002 7.2e-58 229.2 362 38.4
Cre01.g041300 Chlamydomonas reinhardtii HOM05D005843 ORTHO05D007781 5.5e-50 203.0 534 30.0
TAR636G2087 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.4e-47 193.7 173 55.5
VMungo1309G2290 Vigna mungo HOM05D005843 ORTHO05D007781 7.3e-42 176.0 135 64.4
DCAR_015734 Daucus carota HOM05D005843 ORTHO05D007781 1.7e-38 164.9 135 58.5
TAR636G1000 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.4e-37 161.0 126 62.7
TAR636G1324 Trochodendron aralioides HOM05D005843 ORTHO05D007781 2.4e-37 161.0 126 62.7
Haze_26583 Corylus avellana HOM05D005843 ORTHO05D007781 1.6e-36 158.3 492 28.9
C03p92170 Brassica napus HOM05D005843 ORTHO05D040940 3.0e-27 127.5 67 89.6
BolC3t21533H Brassica oleracea HOM05D005843 ORTHO05D040940 3.0e-27 127.5 67 89.6
BraA10t45356Z Brassica rapa HOM05D005843 ORTHO05D007781 2.1e-25 121.3 65 86.2
AUR62040681 Chenopodium quinoa HOM05D005843 ORTHO05D007781 5.8e-23 113.2 187 36.4
DCAR_015735 Daucus carota HOM05D005843 ORTHO05D007781 2.2e-22 111.3 60 83.3
TAR636G3605 Trochodendron aralioides HOM05D005843 ORTHO05D007781 3.9e-19 100.5 57 75.4
SEGI_06123 Sequoiadendron giganteum HOM05D005843 ORTHO05D007781 5.1e-19 100.1 115 47.0
Hma1.2p1_1611F.1_g293520 Hydrangea macrophylla HOM05D005843 ORTHO05D007781 1.5e-18 98.6 52 82.7
SEGI_08652 Sequoiadendron giganteum HOM05D005843 ORTHO05D000001 6.2e-17 93.2 57 66.7
VMungo1309G1664 Vigna mungo HOM05D005843 ORTHO05D007781 2.4e-16 91.3 220 31.8
TAR636G0893 Trochodendron aralioides HOM05D005843 ORTHO05D007781 7.8e-12 76.3 64 56.2
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 2.5e-10 71.2 74 51.4


User provided reference genes

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