Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G01910 Arabidopsis thaliana HOM05D006969 ORTHO05D008826 2.1e-83 312.4 165 100.0
AL6G10120 Arabidopsis lyrata HOM05D006969 ORTHO05D008826 1.5e-49 199.9 136 85.3
Carub.0024s0013 Capsella rubella HOM05D006969 ORTHO05D008826 1.4e-42 176.8 139 76.3
CARHR212260 Cardamine hirsuta HOM05D006969 ORTHO05D008826 4.0e-42 175.3 130 78.5
Aa31LG5G11450 Aethionema arabicum HOM05D006969 ORTHO05D008826 3.2e-39 165.6 139 70.5
BcaB01g06123 Brassica carinata HOM05D006969 ORTHO05D008826 1.3e-37 160.2 147 66.7
BolC3t12589H Brassica oleracea HOM05D006969 ORTHO05D008826 1.3e-37 160.2 147 66.7
BraA03t09395Z Brassica rapa HOM05D006969 ORTHO05D008826 1.3e-37 160.2 147 66.0
Thhalv10015463m.g Eutrema salsugineum HOM05D006969 ORTHO05D008826 2.3e-37 159.5 144 66.0
Sp6g41160 Schrenkiella parvula HOM05D006969 ORTHO05D008826 5.1e-37 158.3 161 62.1
BcaB01g04376 Brassica carinata HOM05D006969 ORTHO05D008826 8.4e-32 141.0 144 61.1
C03p00200 Brassica napus HOM05D006969 ORTHO05D008826 9.3e-31 137.5 136 63.2
A03p00060 Brassica napus HOM05D006969 ORTHO05D008826 2.7e-30 136.0 125 65.6
THA.LOC104823322 Tarenaya hassleriana HOM05D006969 ORTHO05D008826 1.3e-27 127.1 126 62.7
Sabra04G0154500 Salix brachista HOM05D006969 ORTHO05D008826 3.6e-27 125.6 145 53.1
Potri.006G109400 Populus trichocarpa HOM05D006969 ORTHO05D008826 1.2e-25 120.6 144 54.2
Manes.09G123300 Manihot esculenta HOM05D006969 ORTHO05D008826 2.0e-25 119.8 143 51.0
Ah.15g089930 Amaranthus hybridus HOM05D006969 ORTHO05D008826 4.5e-25 118.6 155 47.1
Potri.016G138300 Populus trichocarpa HOM05D006969 ORTHO05D008826 4.5e-25 118.6 146 52.1
Haze_21189 Corylus avellana HOM05D006969 ORTHO05D008826 7.6e-25 117.9 145 50.3
Sabra06G0085100 Salix brachista HOM05D006969 ORTHO05D008826 2.9e-24 115.9 144 52.8
PGR004G2771 Punica granatum HOM05D006969 ORTHO05D008826 3.8e-24 115.5 146 50.7
Cfa017015 Carpinus fangiana HOM05D006969 ORTHO05D008826 3.2e-23 112.5 143 49.7
Prupe.6G295300 Prunus persica HOM05D006969 ORTHO05D008826 4.2e-23 112.1 141 50.4
Cpa.g.sc86.76 Carica papaya HOM05D006969 ORTHO05D008826 5.4e-23 111.7 142 51.4
TWI74G1273 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 7.1e-23 111.3 150 46.7
TAR623G0846 Trochodendron aralioides HOM05D006969 ORTHO05D008826 1.6e-22 110.2 141 48.2
Duzib212G0164 Durio zibethinus HOM05D006969 ORTHO05D008826 2.7e-22 109.4 154 46.1
Sopen06g034210 Solanum pennellii HOM05D006969 ORTHO05D008826 6.0e-22 108.2 152 46.7
CiPaw.10G165400 Carya illinoinensis HOM05D006969 ORTHO05D008826 2.3e-21 106.3 142 46.5
Dinv16967 Davidia involucrata HOM05D006969 ORTHO05D008826 2.3e-21 106.3 145 46.9
CsaV3_4G027220 Cucumis sativus L. HOM05D006969 ORTHO05D008826 3.0e-21 105.9 140 47.9
DCAR_023968 Daucus carota HOM05D006969 ORTHO05D008826 3.0e-21 105.9 106 54.7
FAN05G1635 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.0e-21 105.9 145 49.7
Solyc06g082850.4 Solanum lycopersicum HOM05D006969 ORTHO05D008826 3.0e-21 105.9 152 46.7
Sed0006435 Sechium edule HOM05D006969 ORTHO05D008826 3.9e-21 105.5 136 47.8
RcHm_v2.0_Chr3g0460321 Rosa chinensis HOM05D006969 ORTHO05D008826 8.7e-21 104.4 145 48.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.1e-20 104.0 142 47.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.1e-20 104.0 142 47.9
CANSAT25G2928 Cannabis sativa HOM05D006969 ORTHO05D008826 1.9e-20 103.2 157 45.2
FAN09G3593 Fragaria x ananassa HOM05D006969 ORTHO05D008826 1.9e-20 103.2 145 47.6
ClCG04G006330 Citrullus lanatus HOM05D006969 ORTHO05D008826 2.5e-20 102.8 146 43.2
FvH4_6g09670 Fragaria vesca HOM05D006969 ORTHO05D008826 3.3e-20 102.4 89 61.8
FAN14G4271 Fragaria x ananassa HOM05D006969 ORTHO05D008826 3.3e-20 102.4 89 61.8
MD04G1175800 Malus domestica HOM05D006969 ORTHO05D008826 3.3e-20 102.4 140 45.7
Thecc.04G150100 Theobroma cacao HOM05D006969 ORTHO05D008826 3.3e-20 102.4 118 49.2
FAN02G3877 Fragaria x ananassa HOM05D006969 ORTHO05D008826 4.3e-20 102.1 144 49.3
Medtr7g073500 Medicago truncatula HOM05D006969 ORTHO05D008826 4.3e-20 102.1 147 46.3
Atru.chr8.92 Acer truncatum HOM05D006969 ORTHO05D008826 5.6e-20 101.7 90 57.8
Gohir.D10G112800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 7.4e-20 101.3 162 43.8
Gorai.011G124600 Gossypium raimondii HOM05D006969 ORTHO05D008826 7.4e-20 101.3 162 43.8
Cc06_g18790 Coffea canephora HOM05D006969 ORTHO05D008826 9.6e-20 100.9 151 47.0
Ciclev10013711m.g Citrus clementina HOM05D006969 ORTHO05D008826 1.3e-19 100.5 110 54.5
Hund19755 Selenicereus undatus HOM05D006969 ORTHO05D008826 2.1e-19 99.8 143 46.2
Lj1g0009458 Lotus japonicus HOM05D006969 ORTHO05D008826 2.8e-19 99.4 140 47.9
Gohir.A10G153400 Gossypium hirsutum HOM05D006969 ORTHO05D008826 3.6e-19 99.0 117 48.7
QL07p031897 Quercus lobata HOM05D006969 ORTHO05D008826 3.6e-19 99.0 89 59.6
Psat3g118680 Pisum sativum HOM05D006969 ORTHO05D008826 4.8e-19 98.6 172 42.4
Migut.J00029 Erythranthe guttata HOM05D006969 ORTHO05D008826 6.2e-19 98.2 93 58.1
Sc20g0007050 Simmondsia chinensis HOM05D006969 ORTHO05D008826 6.2e-19 98.2 88 59.1
AUR62006430 Chenopodium quinoa HOM05D006969 ORTHO05D008826 8.1e-19 97.8 149 43.6
MSTRG.18936 Avicennia marina HOM05D006969 ORTHO05D008826 1.4e-18 97.1 116 48.3
TPR.G24295 Trifolium pratense HOM05D006969 ORTHO05D008826 1.8e-18 96.7 97 56.7
MSTRG.5490 Avicennia marina HOM05D006969 ORTHO05D008826 2.4e-18 96.3 129 46.5
Lalb_Chr01g0023811 Lupinus albus HOM05D006969 ORTHO05D008826 3.1e-18 95.9 129 47.3
Nitab4.5_0002758g0050 Nicotiana tabacum HOM05D006969 ORTHO05D008826 3.1e-18 95.9 126 50.8
AUR62029780 Chenopodium quinoa HOM05D006969 ORTHO05D008826 5.3e-18 95.1 153 41.2
Nitab4.5_0000048g0110 Nicotiana tabacum HOM05D006969 ORTHO05D008826 5.3e-18 95.1 126 50.8
Nitab4.5_0000430g0190 Nicotiana tabacum HOM05D006969 ORTHO05D008826 9.0e-18 94.4 126 50.8
TWI77G0392 Tripterygium wilfordii HOM05D006969 ORTHO05D008826 9.0e-18 94.4 89 57.3
VMungo1383G3295 Vigna mungo HOM05D006969 ORTHO05D008826 9.0e-18 94.4 138 44.9
GSVIVG01030170001 Vitis vinifera HOM05D006969 ORTHO05D008826 1.2e-17 94.0 140 45.7
MELO3C025225.2 Cucumis melo HOM05D006969 ORTHO05D008826 1.5e-17 93.6 156 42.3
PGSC0003DMG400027666 Solanum tuberosum HOM05D006969 ORTHO05D008826 1.5e-17 93.6 136 45.6
MD05G1222900 Malus domestica HOM05D006969 ORTHO05D008826 2.0e-17 93.2 139 41.7
MD12G1190200 Malus domestica HOM05D006969 ORTHO05D008826 2.0e-17 93.2 139 41.7
Rhsim04G0121200 Rhododendron simsii HOM05D006969 ORTHO05D008826 2.0e-17 93.2 137 46.7
vmacro08948 Vaccinium macrocarpon HOM05D006969 ORTHO05D008826 2.0e-17 93.2 150 44.0
Glyma.18G213000 Glycine max HOM05D006969 ORTHO05D008826 3.4e-17 92.4 84 59.5
Glyma.09G273800 Glycine max HOM05D006969 ORTHO05D008826 5.8e-17 91.7 135 45.2
Gohir.A02G002800 Gossypium hirsutum HOM05D006969 ORTHO05D008826 5.8e-17 91.7 103 51.5
Gohir.D02G003100 Gossypium hirsutum HOM05D006969 ORTHO05D008826 5.8e-17 91.7 101 50.5
Phvul.008G081600 Phaseolus vulgaris HOM05D006969 ORTHO05D008826 5.8e-17 91.7 138 44.2
Gorai.005G003600 Gossypium raimondii HOM05D006969 ORTHO05D008826 7.6e-17 91.3 103 51.5
HanXRQChr01g0000581 Helianthus annuus HOM05D006969 ORTHO05D008826 1.3e-16 90.5 86 55.8
ECA248G1739 Erigeron canadensis HOM05D000251 ORTHO05D002506 1.7e-16 90.1 86 57.0
EL10Ac7g17114 Beta vulgaris HOM05D006969 ORTHO05D008826 3.8e-16 89.0 95 51.6
arahy.Tifrunner.gnm1.ann1.F2WGAE Arachis hypogaea HOM05D006969 ORTHO05D008826 4.9e-16 88.6 82 61.0
Peaxi162Scf00732g00235 Petunia axillaris HOM05D006969 ORTHO05D008826 4.9e-16 88.6 125 46.4
arahy.Tifrunner.gnm1.ann1.M5JM96 Arachis hypogaea HOM05D006969 ORTHO05D008826 6.4e-16 88.2 82 61.0
arahy.Tifrunner.gnm1.ann1.K8QDZW Arachis hypogaea HOM05D006969 ORTHO05D008826 8.4e-16 87.8 82 59.8
QL07p007469 Quercus lobata HOM05D006969 ORTHO05D008826 1.4e-15 87.0 72 63.9
COL.COLO4_03930 Corchorus olitorius HOM05D006969 ORTHO05D008826 3.2e-15 85.9 85 57.6
Duzib151G0817 Durio zibethinus HOM05D006969 ORTHO05D008826 5.5e-15 85.1 142 39.4
Aqoxy2G00712 Aquilegia oxysepala HOM05D006969 ORTHO05D008826 7.1e-15 84.7 147 36.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 9.3e-15 84.3 82 58.5
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 9.3e-15 84.3 82 58.5
arahy.Tifrunner.gnm1.ann1.PQ2I5M Arachis hypogaea HOM05D006969 ORTHO05D008826 1.2e-14 84.0 82 58.5
unitig_22.g6613 Utricularia gibba HOM05D006969 ORTHO05D008826 3.0e-13 79.3 89 50.6
Oeu038184.1 Olea europaea HOM05D006969 ORTHO05D008826 3.9e-13 79.0 122 44.3
PSO339G3220 Papaver somniferum HOM05D006969 ORTHO05D008826 1.1e-12 77.4 143 37.1
PSO384G0233 Papaver somniferum HOM05D006969 ORTHO05D008826 1.5e-12 77.0 143 37.1
SalBow7G4609 Salvia bowleyana HOM05D006969 ORTHO05D008826 5.6e-12 75.1 98 46.9
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 7.4e-12 74.7 88 47.7
Nitab4.5_0002655g0130 Nicotiana tabacum HOM05D006969 ORTHO05D008826 7.4e-12 74.7 102 45.1
Rhsim04G0114700 Rhododendron simsii HOM05D006969 ORTHO05D008826 7.4e-12 74.7 91 50.5
vmacro08947 Vaccinium macrocarpon HOM05D000266 ORTHO05D008826 1.3e-11 73.9 64 62.5
CDE06G1555 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 3.7e-11 72.4 88 46.6
unitig_8.g3270 Utricularia gibba HOM05D006969 ORTHO05D008826 3.1e-10 69.3 75 46.7
Lsat_1_v5_gn_5_152061 Lactuca sativa HOM05D006969 ORTHO05D008826 6.9e-10 68.2 86 46.5
Oeu060427.1 Olea europaea HOM05D006969 ORTHO05D008826 1.5e-09 67.0 58 56.9
Rhsim03G0028100 Rhododendron simsii HOM05D006969 ORTHO05D008826 5.8e-09 65.1 62 59.7
Rhsim08G0240100 Rhododendron simsii HOM05D006969 ORTHO05D008826 7.6e-09 64.7 62 61.3
MBI03_g05807_MAGBIO Magnolia biondii HOM05D006969 ORTHO05D008826 1.7e-08 63.5 120 35.8
Nn5g26829 Nelumbo nucifera HOM05D006969 ORTHO05D008826 2.5e-07 59.7 112 41.1


User provided reference genes

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