Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 3.6e-312 1074.7 528 100.0
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 8.5e-304 1046.2 509 97.8
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 4.4e-300 1033.9 509 96.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.7e-296 1021.9 509 94.9
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.9e-287 991.9 506 93.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.2e-286 989.2 496 94.0
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.3e-275 952.6 509 88.4
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.3e-275 952.6 509 88.0
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 2.2e-275 951.8 509 88.0
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 2.2e-275 951.8 509 88.0
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.0e-272 943.0 507 87.6
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.3e-272 941.8 507 87.4
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 8.3e-267 923.3 509 83.9
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 1.6e-265 919.1 510 84.3
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.8e-237 825.9 500 75.2
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 5.8e-236 820.8 506 73.9
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.4e-235 817.0 509 74.3
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.1e-234 816.6 509 74.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 7.1e-234 813.9 509 73.3
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.5e-233 811.6 509 73.9
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.0e-232 810.1 510 72.7
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 8.7e-232 807.0 509 72.5
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 1.3e-230 803.1 490 74.3
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.8e-229 799.3 509 71.9
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 3.1e-229 798.5 511 71.6
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.5e-228 796.2 507 72.8
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 2.6e-228 795.4 495 73.3
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 4.5e-228 794.7 495 72.5
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.2e-225 786.6 510 71.6
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 2.1e-225 785.8 500 74.4
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 2.7e-225 785.4 511 71.6
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 3.5e-225 785.0 492 73.4
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 6.7e-224 780.8 509 71.5
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 2.5e-223 778.9 492 73.0
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 9.6e-223 776.9 510 71.2
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.3e-222 776.5 518 70.7
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-222 776.5 509 71.3
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.8e-222 775.4 510 71.0
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.8e-222 775.4 510 71.0
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 4.8e-222 774.6 503 72.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 6.2e-222 774.2 500 71.4
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.1e-221 773.5 508 71.3
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.4e-221 773.1 489 72.2
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 2.4e-221 772.3 503 71.2
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 1.5e-220 769.6 539 67.7
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.5e-220 769.6 495 71.5
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-219 766.5 522 69.5
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.9e-219 765.4 511 70.1
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 6.0e-217 757.7 489 71.2
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 2.3e-216 755.7 501 69.5
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 3.0e-216 755.4 501 69.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.9e-215 752.7 513 68.4
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 2.5e-215 752.3 489 72.2
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.5e-215 752.3 501 69.9
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 9.7e-215 750.4 510 69.8
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 1.4e-213 746.5 510 69.8
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.4e-213 745.7 482 71.8
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.2e-212 743.4 490 71.2
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 3.4e-212 741.9 502 69.1
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 5.9e-212 741.1 512 69.5
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.0e-211 740.3 500 67.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.7e-211 739.6 508 68.1
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.9e-210 736.1 489 69.9
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.5e-210 735.7 510 68.2
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 3.2e-210 735.3 513 70.2
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 4.2e-210 734.9 502 67.3
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 1.8e-208 729.6 499 69.1
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 3.3e-207 725.3 502 67.3
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 7.4e-207 724.2 510 66.9
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.7e-206 723.0 502 65.5
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.4e-205 719.9 497 68.2
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.8e-205 719.5 504 66.9
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.3e-205 718.0 573 61.3
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 6.9e-205 717.6 495 68.3
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 6.9e-205 717.6 495 68.3
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 9.1e-205 717.2 509 65.0
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.2e-204 716.8 506 65.4
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.4e-204 715.3 500 66.4
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.3e-203 713.4 517 64.6
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.7e-203 713.0 513 64.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.4e-202 709.9 504 65.1
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 7.2e-202 707.6 509 64.0
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.6e-201 706.4 504 65.1
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 2.0e-199 699.5 489 67.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 5.9e-196 688.0 463 69.3
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 3.2e-194 682.2 515 61.7
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 4.2e-194 681.8 515 61.9
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 4.5e-188 661.8 492 64.8
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 8.0e-185 651.0 497 61.6
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 2.0e-183 646.4 515 60.4
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.7e-179 633.3 429 69.7
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 8.5e-179 630.9 431 68.0
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.2e-178 628.6 512 62.9
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 2.1e-177 626.3 516 58.9
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 8.8e-176 620.9 510 61.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.3e-174 617.1 503 57.9
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.4e-173 611.7 351 78.3
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 5.9e-172 608.2 514 57.6
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 1.1e-170 604.0 512 58.2
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.4e-167 592.0 457 60.0
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 5.0e-163 578.6 418 66.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 3.4e-159 565.8 407 66.6
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.2e-119 434.5 414 52.2
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 3.8e-118 429.5 397 51.4
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 4.9e-118 429.1 394 52.0
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 1.9e-114 417.2 258 72.1
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.9e-114 417.2 384 51.6
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 5.5e-109 399.1 386 48.4
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.7e-73 281.2 172 75.0
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.5e-61 241.5 160 65.0
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.2e-52 211.8 120 80.0
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 2.6e-34 151.0 321 31.5
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 6.4e-33 146.4 110 60.9
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 6.0e-31 139.8 132 54.5
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 9.5e-29 132.5 83 77.1
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 9.5e-29 132.5 83 77.1
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 9.5e-29 132.5 83 77.1
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 8.6e-22 109.4 82 58.5
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.5e-15 87.4 54 68.5
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 8.4e-09 66.2 71 36.6
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.6e-07 62.0 58 37.9


User provided reference genes

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