Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 2.4e-31 138.3 73 100.0
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 2.2e-29 131.7 73 94.5
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 5.0e-29 130.6 71 95.8
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 8.5e-29 129.8 71 94.4
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 6.8e-26 120.2 73 86.3
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 6.8e-26 120.2 73 84.9
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 1.2e-25 119.4 71 85.9
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 3.7e-24 114.4 71 83.1
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 3.7e-24 114.4 71 83.1
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 1.1e-23 112.8 70 82.9
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 1.1e-23 112.8 70 82.9
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 6.6e-21 103.6 67 76.1
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.8e-18 95.5 70 68.6
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 5.2e-18 94.0 70 67.1
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 5.2e-18 94.0 70 67.1
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.2e-17 92.8 67 68.7
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 1.5e-17 92.4 68 66.2
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.5e-17 92.4 70 64.3
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 2.0e-17 92.0 70 67.1
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 3.4e-17 91.3 68 66.2
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 4.4e-17 90.9 67 67.2
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 5.7e-17 90.5 67 65.7
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.5e-17 90.1 68 66.2
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.5e-17 90.1 68 66.2
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 9.8e-17 89.7 70 61.4
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 9.8e-17 89.7 70 61.4
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 1.3e-16 89.4 70 60.0
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.3e-16 89.4 67 65.7
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 1.7e-16 89.0 71 59.2
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.2e-16 88.6 67 65.7
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 2.2e-16 88.6 67 64.2
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.2e-16 88.6 70 65.7
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 2.8e-16 88.2 67 62.7
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 2.8e-16 88.2 67 64.2
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 3.7e-16 87.8 71 57.7
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 3.7e-16 87.8 70 65.7
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 3.7e-16 87.8 68 61.8
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 6.3e-16 87.0 70 60.0
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 8.3e-16 86.7 68 61.8
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.1e-15 86.3 67 62.7
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.4e-15 85.9 65 63.1
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 1.4e-15 85.9 68 61.8
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 1.8e-15 85.5 64 65.6
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 4.1e-15 84.3 64 64.1
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.4e-15 84.0 67 62.7
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 5.4e-15 84.0 67 59.7
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 5.4e-15 84.0 70 58.6
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 7.0e-15 83.6 68 60.3
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 7.0e-15 83.6 70 60.0
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 9.2e-15 83.2 67 58.2
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 9.2e-15 83.2 65 63.1
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 1.2e-14 82.8 73 56.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 1.6e-14 82.4 68 57.4
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.6e-14 82.4 67 58.2
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 2.0e-14 82.0 67 58.2
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 2.7e-14 81.6 64 59.4
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 2.7e-14 81.6 64 57.8
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 2.7e-14 81.6 65 61.5
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 3.5e-14 81.3 64 59.4
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 3.5e-14 81.3 65 58.5
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 5.9e-14 80.5 67 59.7
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 5.9e-14 80.5 65 60.0
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 7.8e-14 80.1 67 56.7
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 1.0e-13 79.7 65 56.9
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 1.0e-13 79.7 65 55.4
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 1.0e-13 79.7 67 55.2
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.3e-13 79.3 64 59.4
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 56.9
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 56.9
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 56.9
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 56.9
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 1.3e-13 79.3 65 56.9
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 1.3e-13 79.3 67 58.2
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 2.3e-13 78.6 66 54.5
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 2.9e-13 78.2 45 88.9
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 3.9e-13 77.8 67 56.7
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 5.0e-13 77.4 65 53.8
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 6.6e-13 77.0 67 59.7
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.5e-12 75.9 67 49.3
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 1.9e-12 75.5 67 55.2
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 1.9e-12 75.5 68 52.9
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 2.5e-12 75.1 68 51.5
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 4.3e-12 74.3 64 53.1
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 7.3e-12 73.6 65 53.8
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 1.2e-11 72.8 71 54.9
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 1.2e-11 72.8 61 60.7
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 6.1e-11 70.5 64 50.0
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 8.0e-11 70.1 44 77.3
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 2.3e-10 68.6 69 52.2
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 5.2e-10 67.4 86 44.2
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 1.5e-09 65.9 76 47.4
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 4.4e-09 64.3 68 48.5
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 6.4e-08 60.5 47 59.6
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 9.2e-07 56.6 62 41.9


User provided reference genes

Program Settings