Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38980 Arabidopsis thaliana HOM05D011065 ORTHO05D009410 4.7e-152 541.2 281 100.0
AL7G10880 Arabidopsis lyrata HOM05D011065 ORTHO05D009410 5.3e-119 431.4 283 83.4
Carub.0007s0080 Capsella rubella HOM05D011065 ORTHO05D009410 1.9e-105 386.3 283 74.2
Thhalv10027283m.g Eutrema salsugineum HOM05D011065 ORTHO05D009410 2.0e-97 359.8 281 71.9
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 3.7e-96 355.5 284 71.8
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 4.4e-81 305.4 284 63.4
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 2.0e-78 296.6 286 63.3
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 2.0e-78 296.6 286 63.3
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 2.0e-78 296.6 286 63.3
BraA08t34348Z Brassica rapa HOM05D011065 ORTHO05D009410 7.7e-78 294.7 285 62.8
A08p23900 Brassica napus HOM05D011065 ORTHO05D009410 2.9e-77 292.7 285 62.1
CARHR247790 Cardamine hirsuta HOM05D011065 ORTHO05D009410 1.2e-67 260.8 203 72.9
BcaC01g00269 Brassica carinata HOM05D011065 ORTHO05D009410 3.4e-65 252.7 286 58.0
C03p77450 Brassica napus HOM05D011065 ORTHO05D009410 3.4e-65 252.7 286 58.0
BolC3t20000H Brassica oleracea HOM05D011065 ORTHO05D009410 3.4e-65 252.7 286 58.0
Aa31LG6G16270 Aethionema arabicum HOM05D011065 ORTHO05D009410 6.6e-61 238.4 283 52.7
THA.LOC104824794 Tarenaya hassleriana HOM05D011065 ORTHO05D009410 1.3e-32 144.4 238 43.3
CARHR247780 Cardamine hirsuta HOM05D011065 ORTHO05D009410 4.6e-22 109.4 65 81.5
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 1.8e-13 80.9 279 29.7
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 1.9e-12 77.4 280 30.7
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 1.9e-12 77.4 289 29.4
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 4.3e-12 76.3 266 30.8
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 5.6e-12 75.9 317 26.8
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 5.6e-12 75.9 263 29.3
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 8.1e-11 72.0 270 29.6
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 3.1e-10 70.1 288 25.7
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 5.3e-10 69.3 265 30.2
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 9.0e-10 68.6 266 28.2
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 9.0e-10 68.6 279 26.2
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 9.0e-10 68.6 272 27.6
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.2e-09 68.2 265 29.8
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 1.5e-09 67.8 266 28.2
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 1.5e-09 67.8 275 29.8
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 2.0e-09 67.4 283 30.4
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 2.0e-09 67.4 275 28.0
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 2.6e-09 67.0 275 28.7
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 4.5e-09 66.2 279 30.5
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 4.5e-09 66.2 280 26.8
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 4.5e-09 66.2 279 25.8
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 5.8e-09 65.9 272 29.0
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 1.3e-08 64.7 281 27.8
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.7e-08 64.3 277 28.5
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 2.2e-08 63.9 273 28.6
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 2.2e-08 63.9 278 25.2
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 2.2e-08 63.9 264 28.8
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 3.8e-08 63.2 269 28.3
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 4.9e-08 62.8 266 27.4
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 1.1e-07 61.6 291 26.8
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 1.4e-07 61.2 265 27.9
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 1.4e-07 61.2 274 26.3
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 3.2e-07 60.1 275 27.6
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 3.2e-07 60.1 274 25.9
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 4.2e-07 59.7 274 27.0
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 4.2e-07 59.7 355 25.4
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 5.5e-07 59.3 268 25.4
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 5.5e-07 59.3 272 27.9
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 5.5e-07 59.3 269 29.4
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 9.3e-07 58.5 275 27.3
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 1.2e-06 58.2 283 25.8
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 1.2e-06 58.2 294 27.2
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.2e-06 58.2 269 27.9
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.6e-06 57.8 265 26.4
CDE02G1861 Ceratophyllum demersum HOM05D055785 ORTHO05D043884 2.1e-06 57.4 156 33.3
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 2.7e-06 57.0 267 27.0
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 2.7e-06 57.0 280 30.0
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 4.6e-06 56.2 263 27.0
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 6.0e-06 55.8 276 25.7
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 6.0e-06 55.8 267 29.6
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 7.9e-06 55.5 269 26.8
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 7.9e-06 55.5 269 26.0


User provided reference genes

Program Settings