Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38905 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 2.4e-133 478.8 237 100.0
AL7G10790 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.1e-77 293.9 175 85.7
AL2G17580 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 4.5e-71 271.9 175 79.4
Thhalv10027568m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 1.8e-51 206.8 178 64.0
BraA08t34353Z Brassica rapa HOM05D009526 ORTHO05D011552 1.4e-48 197.2 181 63.5
A08p23950 Brassica napus HOM05D009526 ORTHO05D011552 1.8e-48 196.8 181 63.5
BcaC01g00263 Brassica carinata HOM05D009526 ORTHO05D011552 7.0e-48 194.9 180 63.9
BolC3t19995H Brassica oleracea HOM05D009526 ORTHO05D011552 2.7e-47 193.0 180 63.3
C03p77390 Brassica napus HOM05D009526 ORTHO05D011552 3.5e-47 192.6 180 62.8
BcaB03g12231 Brassica carinata HOM05D009526 ORTHO05D011552 4.3e-45 185.7 180 59.4
Thhalv10000606m.g Eutrema salsugineum HOM05D009526 ORTHO05D011552 3.5e-31 139.4 171 48.5
BcaB08g34975 Brassica carinata HOM05D009526 ORTHO05D011552 2.3e-27 126.7 163 47.9
BcaC07g41164 Brassica carinata HOM05D009526 ORTHO05D011552 2.3e-27 126.7 163 47.9
C08p41710 Brassica napus HOM05D009526 ORTHO05D011552 8.9e-27 124.8 162 47.5
CARHR112100 Cardamine hirsuta HOM05D009526 ORTHO05D011552 2.0e-26 123.6 177 44.1
A09p58360 Brassica napus HOM05D009526 ORTHO05D011552 4.9e-25 119.0 162 45.1
BraA09t41228Z Brassica rapa HOM05D009526 ORTHO05D011552 4.9e-25 119.0 162 45.1
BolC8t51734H Brassica oleracea HOM05D009526 ORTHO05D011552 1.4e-24 117.5 162 45.7
Sp5g32610 Schrenkiella parvula HOM05D009526 ORTHO05D011552 1.4e-24 117.5 151 44.4
AT2G21237 Arabidopsis thaliana HOM05D009526 ORTHO05D011552 6.0e-23 112.1 159 40.9
THA.LOC104807777 Tarenaya hassleriana HOM05D009526 ORTHO05D011552 2.1e-20 103.6 128 46.9
AL4G10370 Arabidopsis lyrata HOM05D009526 ORTHO05D011552 1.1e-19 101.3 151 39.7
QL11p046590 Quercus lobata HOM05D009526 ORTHO05D011552 3.5e-15 86.3 85 49.4
Carub.0004s0028 Capsella rubella HOM05D009526 ORTHO05D011552 7.8e-15 85.1 133 40.6
Sp4g00430 Schrenkiella parvula HOM05D009526 ORTHO05D011552 4.8e-12 75.9 73 50.7
Ciclev10030263m.g Citrus clementina HOM05D009526 ORTHO05D011552 2.4e-11 73.6 67 52.2
TWI75G0567 Tripterygium wilfordii HOM05D009526 ORTHO05D011552 5.8e-10 68.9 67 46.3
Rhsim11G0184400 Rhododendron simsii HOM05D030420 ORTHO05D011552 3.8e-09 66.2 189 27.5
Duzib132G0500 Durio zibethinus HOM05D009526 ORTHO05D011552 1.4e-08 64.3 163 32.5
RhsimUnG0205400 Rhododendron simsii HOM05D030420 ORTHO05D011552 2.1e-07 60.5 168 27.4
Sc16g0010960 Simmondsia chinensis HOM05D009526 ORTHO05D011552 8.7e-06 55.1 144 29.9


User provided reference genes

Program Settings