Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 7.4e-65 250.4 125 100.0
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 2.2e-53 212.2 120 88.3
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 2.2e-53 212.2 125 86.4
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 3.6e-51 204.9 125 82.4
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.6e-49 198.7 125 80.0
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 4.4e-49 198.0 125 80.0
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.2e-46 189.9 125 72.0
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 3.5e-46 188.3 125 75.2
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 8.5e-45 183.7 125 70.4
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 8.5e-45 183.7 125 70.4
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.1e-44 183.3 125 66.4
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 2.5e-44 182.2 125 75.2
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 3.2e-44 181.8 125 74.4
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 3.2e-44 181.8 125 74.4
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 3.2e-44 181.8 125 68.0
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 5.5e-44 181.0 125 68.8
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 68.8
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 68.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 7.2e-44 180.6 125 68.8
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 9.4e-44 180.3 125 66.4
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.2e-43 179.9 125 67.2
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.6e-43 179.5 125 68.8
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 1.6e-43 179.5 125 68.8
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 1.6e-43 179.5 125 68.8
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 2.1e-43 179.1 125 67.2
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 2.1e-43 179.1 125 76.0
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 2.1e-43 179.1 125 67.2
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 3.6e-43 178.3 125 67.2
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 4.7e-43 177.9 125 68.0
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 4.7e-43 177.9 124 67.7
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 4.7e-43 177.9 124 67.7
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 68.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 6.1e-43 177.6 125 63.2
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 1.0e-42 176.8 125 68.8
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.0e-42 176.8 125 66.4
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.0e-42 176.8 125 65.6
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.4e-42 176.4 125 66.4
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 1.8e-42 176.0 125 68.8
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.8e-42 176.0 125 65.6
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 1.8e-42 176.0 125 67.2
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 2.3e-42 175.6 125 67.2
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 2.3e-42 175.6 125 65.6
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 4.0e-42 174.9 125 65.6
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 5.2e-42 174.5 125 65.6
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 5.2e-42 174.5 125 67.2
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 5.2e-42 174.5 125 66.4
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 5.2e-42 174.5 125 64.0
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 5.2e-42 174.5 125 66.4
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 65.6
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 65.6
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 65.6
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 6.8e-42 174.1 125 64.0
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 8.8e-42 173.7 125 64.0
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.8e-42 173.7 125 65.6
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 8.8e-42 173.7 125 65.6
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 1.2e-41 173.3 125 65.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.5e-41 172.9 125 65.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.0e-41 172.6 125 65.6
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 2.0e-41 172.6 125 63.2
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.6e-41 172.2 132 62.1
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 4.4e-41 171.4 125 63.2
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 5.7e-41 171.0 125 64.8
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 7.5e-41 170.6 137 62.8
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 4.8e-40 167.9 125 64.0
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 6.3e-40 167.5 125 63.2
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 6.3e-40 167.5 125 62.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 8.3e-40 167.2 125 64.8
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.4e-39 166.4 125 62.4
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 2.4e-39 165.6 124 62.1
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 2.4e-39 165.6 125 65.6
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.4e-39 165.6 125 64.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 3.1e-39 165.2 125 64.0
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 4.1e-39 164.9 125 65.6
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 5.4e-39 164.5 125 65.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 5.4e-39 164.5 125 65.6
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 7.0e-39 164.1 125 60.8
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 9.1e-39 163.7 125 61.6
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 1.2e-38 163.3 125 61.6
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.6e-38 162.9 125 61.6
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.0e-38 162.5 125 64.8
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 2.0e-38 162.5 125 64.0
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 2.7e-38 162.2 125 61.6
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 3.5e-38 161.8 125 61.6
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.5e-38 161.8 125 63.2
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 4.5e-38 161.4 125 63.2
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 5.9e-38 161.0 125 64.8
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 7.7e-38 160.6 125 65.6
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 1.3e-37 159.8 125 60.0
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 1.7e-37 159.5 125 62.4
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 6.5e-37 157.5 125 61.6
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 6.5e-37 157.5 102 70.6
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 8.6e-37 157.1 125 60.8
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 1.1e-36 156.8 125 60.8
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 3.3e-36 155.2 115 63.5
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.2e-35 153.3 102 71.6
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 2.1e-35 152.5 150 54.0
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 4.7e-35 151.4 125 58.4
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.8e-34 149.4 122 55.7
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 1.8e-34 149.4 172 48.3
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 3.0e-34 148.7 125 56.8
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.8e-34 147.5 102 68.6
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.9e-34 147.1 102 68.6
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 8.9e-34 147.1 122 57.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 8.9e-34 147.1 122 57.4
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 8.9e-34 147.1 124 58.1
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 2.0e-33 146.0 125 56.0
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 2.0e-33 146.0 204 42.2
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 4.9e-32 141.4 125 56.0
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 1.2e-30 136.7 125 53.6
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 1.3e-29 133.3 119 58.0
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 4.7e-27 124.8 113 50.4
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 5.4e-23 111.3 81 70.4
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.6e-22 109.8 81 70.4
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 8.6e-21 104.0 78 70.5
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 8.6e-21 104.0 78 70.5
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-19 99.0 81 60.5
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-19 99.0 81 60.5
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 4.4e-17 91.7 65 73.8
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 2.2e-16 89.4 107 46.7
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 2.2e-16 89.4 66 63.6
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 7.8e-14 80.9 67 58.2
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.3e-12 75.5 57 61.4
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.3e-12 75.5 57 61.4
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 1.5e-09 66.6 52 59.6
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 4.4e-09 65.1 44 68.2
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 1.3e-08 63.5 45 66.7
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 1.3e-08 63.5 57 52.6
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 2.4e-07 59.3 44 65.9


User provided reference genes

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