Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38410 Arabidopsis thaliana HOM05D011863 ORTHO05D014316 2.2e-64 249.2 164 100.0
AL7G10280 Arabidopsis lyrata HOM05D011863 ORTHO05D014316 3.3e-52 208.8 165 87.9
CARHR294140 Cardamine hirsuta HOM05D011863 ORTHO05D014316 7.8e-30 134.4 146 68.5
Carub.0007s0030 Capsella rubella HOM05D011863 ORTHO05D014316 8.9e-26 120.9 136 63.2
Thhalv10026303m.g Eutrema salsugineum HOM05D011863 ORTHO05D014316 4.1e-23 112.1 174 52.3
Sp7g37360 Schrenkiella parvula HOM05D011863 ORTHO05D014316 1.7e-21 106.7 136 55.1
BcaNung01986 Brassica carinata HOM05D011863 ORTHO05D014316 8.6e-21 104.4 178 50.0
C07p63760 Brassica napus HOM05D011863 ORTHO05D014316 8.6e-21 104.4 178 50.0
BcaB08g35599 Brassica carinata HOM05D011863 ORTHO05D014316 1.7e-16 90.1 69 72.5
BolC7t46786H Brassica oleracea HOM05D000201 ORTHO05D000490 1.1e-15 87.4 70 71.4
BraA06t27770Z Brassica rapa HOM05D000201 ORTHO05D000490 1.9e-15 86.7 68 72.1
BcaC07g37327 Brassica carinata HOM05D011863 ORTHO05D014316 3.2e-15 85.9 141 48.9
C08p07690 Brassica napus HOM05D011863 ORTHO05D014316 9.2e-15 84.3 136 49.3
BolC8t47615H Brassica oleracea HOM05D011863 ORTHO05D014316 9.2e-15 84.3 136 49.3
A08p06630 Brassica napus HOM05D011863 ORTHO05D014316 1.0e-13 80.9 132 47.0
COL.COLO4_17991 Corchorus olitorius HOM05D018564 ORTHO05D019060 6.0e-06 55.1 135 35.6


User provided reference genes

Program Settings