Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38092 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.0e-64 250.0 131 100.0
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 7.3e-47 190.7 107 89.7
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 3.6e-46 188.3 103 90.3
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.2e-44 183.3 110 83.6
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.2e-44 183.3 107 86.0
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 1.7e-43 179.5 107 82.2
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-41 172.9 107 78.5
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-41 172.9 107 78.5
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 1.6e-41 172.9 107 78.5
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 1.6e-41 172.9 107 78.5
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 2.7e-41 172.2 107 79.4
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 3.5e-41 171.8 107 77.6
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.7e-40 169.5 105 78.1
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 2.1e-38 162.5 103 77.7
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 9.9e-36 153.7 107 72.9
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.3e-35 153.3 107 72.0
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.7e-35 152.9 107 72.0
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 3.2e-34 148.7 103 71.8
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 4.2e-34 148.3 107 72.0
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 7.1e-34 147.5 107 69.2
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 9.3e-34 147.1 103 70.9
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 9.3e-34 147.1 107 68.2
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.2e-33 146.7 107 68.2
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 1.2e-33 146.7 107 68.2
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 1.6e-33 146.4 107 68.2
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 1.6e-33 146.4 107 69.2
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 2.1e-33 146.0 107 69.2
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.1e-33 146.0 103 69.9
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 2.1e-33 146.0 103 70.9
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.7e-33 145.6 103 71.8
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 2.7e-33 145.6 103 71.8
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 3.5e-33 145.2 107 67.3
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 4.6e-33 144.8 103 69.9
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 4.6e-33 144.8 107 69.2
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 4.6e-33 144.8 103 68.9
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.0e-32 143.7 103 68.9
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 1.0e-32 143.7 103 68.9
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 1.0e-32 143.7 103 68.9
DCAR_000979 Daucus carota HOM05D000329 ORTHO05D005330 1.3e-32 143.3 107 68.2
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.7e-32 142.9 107 66.4
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 2.3e-32 142.5 107 68.2
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 2.3e-32 142.5 107 67.3
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 2.3e-32 142.5 107 69.2
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 6.6e-32 141.0 107 68.2
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 6.6e-32 141.0 107 64.5
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 8.7e-32 140.6 107 66.4
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 1.1e-31 140.2 107 64.5
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.5e-31 139.8 107 68.2
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.5e-31 139.8 109 66.1
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 4.3e-31 138.3 118 61.9
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 4.3e-31 138.3 107 66.4
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 4.3e-31 138.3 109 65.1
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 4.3e-31 138.3 95 74.7
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 5.6e-31 137.9 107 64.5
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.6e-31 137.9 103 66.0
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.6e-31 137.9 107 64.5
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 7.4e-31 137.5 107 64.5
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 9.6e-31 137.1 103 65.0
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 1.3e-30 136.7 107 64.5
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 1.3e-30 136.7 102 70.6
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.6e-30 136.3 101 69.3
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 2.1e-30 136.0 107 64.5
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 2.8e-30 135.6 107 65.4
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 2.8e-30 135.6 91 72.5
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 4.8e-30 134.8 103 64.1
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 4.8e-30 134.8 107 63.6
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 6.2e-30 134.4 107 63.6
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 6.2e-30 134.4 91 76.9
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 5.3e-29 131.3 121 60.3
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 6.9e-29 131.0 103 63.1
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 1.2e-28 130.2 107 62.6
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.5e-28 129.8 107 62.6
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 2.6e-28 129.0 98 63.3
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 4.5e-28 128.3 107 61.7
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 2.2e-27 125.9 96 63.5
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 2.4e-26 122.5 107 59.8
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 5.5e-26 121.3 104 55.8
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.2e-25 120.2 103 60.2
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 1.6e-25 119.8 107 53.3
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 2.1e-25 119.4 107 55.1
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 2.3e-24 115.9 107 54.2
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 8.1e-22 107.5 90 61.1
Cpa.g.sc162.42 Carica papaya HOM05D000329 ORTHO05D028196 1.4e-21 106.7 79 68.4
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 5.3e-21 104.8 107 47.7
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.2e-20 103.6 88 55.7
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 1.2e-20 103.6 88 55.7
ClCG06G009450 Citrullus lanatus HOM05D000329 ORTHO05D005330 5.8e-20 101.3 86 62.8
CDE08G1167 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 1.0e-19 100.5 96 51.0
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 1.3e-19 100.1 82 59.8
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 1.7e-19 99.8 94 52.1
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 2.2e-19 99.4 96 53.1
COL.COLO4_15480 Corchorus olitorius HOM05D000329 ORTHO05D005330 1.1e-18 97.1 107 50.5
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 1.1e-18 97.1 116 44.0
Haze_04429 Corylus avellana HOM05D000329 ORTHO05D005330 1.9e-18 96.3 64 76.6
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 2.1e-17 92.8 103 51.5
Nitab4.5_0000432g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.0e-16 90.5 70 65.7
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 8.7e-16 87.4 103 41.7
Nitab4.5_0003285g0080 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.1e-15 87.0 110 51.8
Sed0009230 Sechium edule HOM05D000329 ORTHO05D028196 1.1e-15 87.0 56 76.8
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 1.5e-15 86.7 61 72.1
SEGI_11781 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 1.4e-13 80.1 72 56.9
BraA01t03057Z Brassica rapa HOM05D000329 ORTHO05D028196 7.2e-10 67.8 40 82.5
A06p19390 Brassica napus HOM05D000329 ORTHO05D028196 1.6e-09 66.6 40 80.0
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 2.8e-06 55.8 99 35.4


User provided reference genes

Program Settings