Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G38080 Arabidopsis thaliana HOM05D010110 ORTHO05D012281 4.2e-39 164.9 129 100.0
AL7G12540 Arabidopsis lyrata HOM05D010110 ORTHO05D012281 3.5e-25 118.6 131 85.5
Sp7g10130 Schrenkiella parvula HOM05D010110 ORTHO05D012281 1.8e-18 96.3 135 60.7
Aa31LG6G15040 Aethionema arabicum HOM05D010110 ORTHO05D012281 1.7e-16 89.7 147 46.3
Thhalv10026588m.g Eutrema salsugineum HOM05D010110 ORTHO05D012281 9.5e-15 84.0 51 82.4
A09p57500 Brassica napus HOM05D010110 ORTHO05D012281 2.6e-12 75.9 101 49.5
BraA09t41141Z Brassica rapa HOM05D010110 ORTHO05D012281 2.6e-12 75.9 101 49.5
Thhalv10000560m.g Eutrema salsugineum HOM05D010110 ORTHO05D012281 7.5e-12 74.3 145 53.1
BcaC07g41062 Brassica carinata HOM05D010110 ORTHO05D012281 2.9e-11 72.4 101 50.5
C08p40610 Brassica napus HOM05D010110 ORTHO05D012281 2.9e-11 72.4 101 50.5
Sp4g01530 Schrenkiella parvula HOM05D010110 ORTHO05D012281 1.6e-09 66.6 71 66.2
BolC8t51628H Brassica oleracea HOM05D010110 ORTHO05D012281 1.0e-08 63.9 101 47.5
C04p51720 Brassica napus HOM05D010110 ORTHO05D012281 6.6e-08 61.2 100 47.0
BolC4t26751H Brassica oleracea HOM05D010110 ORTHO05D012281 6.6e-08 61.2 100 47.0
BcaB08g35080 Brassica carinata HOM05D010110 ORTHO05D012281 1.1e-07 60.5 105 49.5
AL4G12050 Arabidopsis lyrata HOM05D010110 ORTHO05D012281 1.5e-07 60.1 43 76.7
AL4G12062 Arabidopsis lyrata HOM05D010110 ORTHO05D012281 1.5e-07 60.1 43 76.7
THA.LOC104804174 Tarenaya hassleriana HOM05D010110 ORTHO05D012281 2.5e-07 59.3 51 68.6
CARHR113710 Cardamine hirsuta HOM05D010110 ORTHO05D012281 3.3e-07 58.9 42 76.2
A04p17030 Brassica napus HOM05D010110 ORTHO05D012281 4.3e-07 58.5 105 48.6
BraA04t17331Z Brassica rapa HOM05D010110 ORTHO05D012281 4.3e-07 58.5 105 48.6
Carub.0004s0167 Capsella rubella HOM05D010110 ORTHO05D012281 5.6e-07 58.2 44 72.7
AT2G22510 Arabidopsis thaliana HOM05D010110 ORTHO05D012281 2.1e-06 56.2 42 73.8


User provided reference genes

Program Settings