Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G37925 Arabidopsis thaliana HOM05D007279 ORTHO05D009212 2.8e-120 435.3 218 100.0
AL7G12720 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 2.5e-116 422.2 218 96.3
Carub.0007s0229 Capsella rubella HOM05D007279 ORTHO05D009212 2.7e-115 418.7 218 95.9
CARHR246340 Cardamine hirsuta HOM05D007279 ORTHO05D009212 5.9e-110 401.0 219 92.2
Thhalv10026209m.g Eutrema salsugineum HOM05D007279 ORTHO05D009212 8.0e-107 390.6 217 91.2
Sp7g35570 Schrenkiella parvula HOM05D007279 ORTHO05D009212 6.4e-104 380.9 217 89.9
BcaB03g12324 Brassica carinata HOM05D007279 ORTHO05D009212 4.1e-103 378.3 221 87.8
A08p22940 Brassica napus HOM05D007279 ORTHO05D009212 5.9e-102 374.4 221 86.9
BcaC01g00366 Brassica carinata HOM05D007279 ORTHO05D009212 7.8e-102 374.0 221 86.4
C03p78920 Brassica napus HOM05D007279 ORTHO05D009212 2.3e-101 372.5 221 86.0
BolC3t20136H Brassica oleracea HOM05D007279 ORTHO05D009212 6.6e-101 370.9 221 85.5
BraA08t34256Z Brassica rapa HOM05D007279 ORTHO05D009212 1.9e-100 369.4 221 85.5
Aa31LG6G14860 Aethionema arabicum HOM05D007279 ORTHO05D009212 5.6e-84 314.7 219 78.1
THA.LOC104808254 Tarenaya hassleriana HOM05D007279 ORTHO05D009212 4.1e-79 298.5 203 76.4
Gohir.A02G110900 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.0e-69 267.3 217 67.7
Gohir.D03G063100 Gossypium hirsutum HOM05D007279 ORTHO05D009212 1.7e-69 266.5 217 67.7
Gorai.013G108300 Gossypium raimondii HOM05D007279 ORTHO05D009212 1.7e-69 266.5 217 67.7
Duzib093G1369 Durio zibethinus HOM05D007279 ORTHO05D009212 3.9e-69 265.4 216 64.8
QL09p032239 Quercus lobata HOM05D007279 ORTHO05D009212 1.6e-67 260.0 221 64.3
Potri.005G183000 Populus trichocarpa HOM05D007279 ORTHO05D009212 2.1e-67 259.6 216 64.8
Lalb_Chr08g0241031 Lupinus albus HOM05D007279 ORTHO05D009212 2.8e-67 259.2 205 64.9
Manes.02G169000 Manihot esculenta HOM05D007279 ORTHO05D009212 1.1e-66 257.3 203 66.5
Sabra05G0138700 Salix brachista HOM05D007279 ORTHO05D009212 1.1e-66 257.3 217 63.6
CsaV3_7G022180 Cucumis sativus L. HOM05D007279 ORTHO05D009212 4.0e-66 255.4 164 73.8
Atru.chr13.1590 Acer truncatum HOM05D007279 ORTHO05D009212 9.0e-66 254.2 214 61.7
COL.COLO4_33390 Corchorus olitorius HOM05D007279 ORTHO05D009212 1.2e-65 253.8 216 63.0
Prupe.1G488900 Prunus persica HOM05D007279 ORTHO05D009212 1.5e-65 253.4 209 64.1
MD15G1133300 Malus domestica HOM05D007279 ORTHO05D009212 2.0e-65 253.1 171 74.3
TWI34G0215 Tripterygium wilfordii HOM05D007279 ORTHO05D009212 2.6e-65 252.7 206 64.6
GSVIVG01008801001 Vitis vinifera HOM05D007279 ORTHO05D009212 3.4e-65 252.3 215 62.8
CANSAT25G0430 Cannabis sativa HOM05D007279 ORTHO05D009212 5.8e-65 251.5 177 71.2
AL3G19570 Arabidopsis lyrata HOM05D007279 ORTHO05D009212 9.9e-65 250.8 158 80.4
Eucgr.F03852 Eucalyptus grandis HOM05D007279 ORTHO05D009212 1.7e-64 250.0 151 79.5
MELO3C012712.2 Cucumis melo HOM05D007279 ORTHO05D009212 2.2e-64 249.6 165 73.3
FvH4_2g27960 Fragaria vesca HOM05D007279 ORTHO05D009212 2.2e-64 249.6 211 64.0
FAN20G2640 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.2e-64 249.6 210 64.3
FAN27G1298 Fragaria x ananassa HOM05D007279 ORTHO05D009212 2.9e-64 249.2 208 65.4
AUR62007704 Chenopodium quinoa HOM05D007279 ORTHO05D009212 3.8e-64 248.8 209 61.2
Dinv27265 Davidia involucrata HOM05D007279 ORTHO05D009212 4.9e-64 248.4 217 63.1
Sabra02G0061000 Salix brachista HOM05D007279 ORTHO05D009212 8.4e-64 247.7 134 85.8
unitig_46.g18082 Utricularia gibba HOM05D007279 ORTHO05D009212 8.4e-64 247.7 180 68.3
Ciclev10002484m.g Citrus clementina HOM05D007279 ORTHO05D009212 1.1e-63 247.3 146 79.5
FAN24G0438 Fragaria x ananassa HOM05D007279 ORTHO05D009212 1.1e-63 247.3 211 63.5
Glyma.04G245200 Glycine max HOM05D007279 ORTHO05D009212 1.4e-63 246.9 214 62.6
RcHm_v2.0_Chr6g0296781 Rosa chinensis HOM05D007279 ORTHO05D009212 1.4e-63 246.9 211 63.5
EL10Ac1g01365 Beta vulgaris HOM05D007279 ORTHO05D009212 2.4e-63 246.1 210 63.8
ClCG09G021820 Citrullus lanatus HOM05D007279 ORTHO05D009212 4.2e-63 245.4 139 81.3
PGR044G1698 Punica granatum HOM05D007279 ORTHO05D009212 4.2e-63 245.4 211 61.6
Glyma.06G118000 Glycine max HOM05D007279 ORTHO05D009212 5.4e-63 245.0 212 61.3
Cfa018422 Carpinus fangiana HOM05D007279 ORTHO05D009212 9.3e-63 244.2 203 63.5
AUR62013436 Chenopodium quinoa HOM05D007279 ORTHO05D009212 1.6e-62 243.4 209 60.3
Ah.05g169060 Amaranthus hybridus HOM05D007279 ORTHO05D009212 6.0e-62 241.5 181 65.7
Lsat_1_v5_gn_1_7161 Lactuca sativa HOM05D007279 ORTHO05D009212 1.8e-61 240.0 160 73.1
Sed0026443 Sechium edule HOM05D007279 ORTHO05D009212 1.8e-61 240.0 161 72.7
arahy.Tifrunner.gnm1.ann1.03R76N Arachis hypogaea HOM05D007279 ORTHO05D009212 3.0e-61 239.2 212 58.5
arahy.Tifrunner.gnm1.ann1.G5JU44 Arachis hypogaea HOM05D007279 ORTHO05D009212 3.0e-61 239.2 212 58.5
Migut.C01071 Erythranthe guttata HOM05D007279 ORTHO05D009212 3.9e-61 238.8 209 61.2
Psat5g084400 Pisum sativum HOM05D007279 ORTHO05D009212 3.9e-61 238.8 209 57.4
Rhsim02G0114000 Rhododendron simsii HOM05D007279 ORTHO05D009212 3.9e-61 238.8 203 61.1
CSS0035764 Camellia sinensis var. sinensis HOM05D007279 ORTHO05D009212 6.7e-61 238.0 206 61.2
CiPaw.16G022500 Carya illinoinensis HOM05D007279 ORTHO05D009212 1.5e-60 236.9 217 59.9
HanXRQChr02g0045151 Helianthus annuus HOM05D007279 ORTHO05D009212 1.5e-60 236.9 180 68.3
MSTRG.1407 Avicennia marina HOM05D007279 ORTHO05D009212 3.3e-60 235.7 204 62.3
Nitab4.5_0003485g0020 Nicotiana tabacum HOM05D007279 ORTHO05D009212 3.3e-60 235.7 158 74.1
Ca_16613_v3 Cicer arietinum L. HOM05D007279 ORTHO05D009212 2.1e-59 233.0 206 60.2
DCAR_016660 Daucus carota HOM05D007279 ORTHO05D009212 2.8e-59 232.6 144 79.2
Nitab4.5_0000317g0110 Nicotiana tabacum HOM05D007279 ORTHO05D009212 2.8e-59 232.6 207 61.8
Lj1g0002247 Lotus japonicus HOM05D007279 ORTHO05D009212 3.6e-59 232.3 208 59.6
Peaxi162Scf00066g00422 Petunia axillaris HOM05D007279 ORTHO05D009212 3.6e-59 232.3 208 60.6
Hma1.2p1_0880F.1_g231840 Hydrangea macrophylla HOM05D007279 ORTHO05D009212 4.8e-59 231.9 209 61.7
Medtr3g088645 Medicago truncatula HOM05D007279 ORTHO05D009212 4.8e-59 231.9 211 58.3
ECA247G0566 Erigeron canadensis HOM05D000006 ORTHO05D000001 8.1e-59 231.1 148 77.0
Lj4A677T28 Lonicera japonica HOM05D007279 ORTHO05D009212 1.8e-58 229.9 197 61.4
Lj4A679T22 Lonicera japonica HOM05D007279 ORTHO05D009212 1.8e-58 229.9 197 61.4
Solyc04g057980.3 Solanum lycopersicum HOM05D007279 ORTHO05D009212 1.8e-58 229.9 209 61.2
vmacro17341 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.8e-58 229.9 230 58.3
Cc10_g13680 Coffea canephora HOM05D007279 ORTHO05D009212 2.4e-58 229.6 215 60.5
Actinidia15209 Actinidia chinensis HOM05D000237 ORTHO05D006530 4.0e-58 228.8 163 69.3
Rhsim02G0113900 Rhododendron simsii HOM05D007279 ORTHO05D009212 6.9e-58 228.0 202 59.9
PGSC0003DMG400025319 Solanum tuberosum HOM05D007279 ORTHO05D009212 6.9e-58 228.0 203 61.1
CAN.G405.7 Capsicum annuum HOM05D007279 ORTHO05D009212 9.0e-58 227.6 202 59.9
Aqoxy6G00304 Aquilegia oxysepala HOM05D007279 ORTHO05D009212 1.2e-57 227.3 170 68.8
VMungo1309G2060 Vigna mungo HOM05D007279 ORTHO05D009212 2.0e-57 226.5 207 61.4
Rhsim02G0113400 Rhododendron simsii HOM05D007279 ORTHO05D009212 4.5e-57 225.3 169 68.6
Sopen04g025840 Solanum pennellii HOM05D007279 ORTHO05D009212 4.5e-57 225.3 202 59.9
TAR628G0029 Trochodendron aralioides HOM05D007279 ORTHO05D009212 9.9e-57 224.2 132 79.5
PSO528G0084 Papaver somniferum HOM05D007279 ORTHO05D009212 2.2e-56 223.0 164 68.9
Nn5g28445 Nelumbo nucifera HOM05D007279 ORTHO05D009212 6.4e-56 221.5 128 81.2
Phvul.009G130400 Phaseolus vulgaris HOM05D007279 ORTHO05D009212 1.9e-55 219.9 206 59.2
PSO170G3576 Papaver somniferum HOM05D007279 ORTHO05D009212 4.2e-55 218.8 174 66.7
MBI03_g13490_MAGBIO Magnolia biondii HOM05D007279 ORTHO05D009212 1.6e-54 216.9 125 81.6
ATR0681G064 Amborella trichopoda HOM05D007279 ORTHO05D009212 6.0e-54 214.9 125 80.0
Os04g0539000 Oryza sativa ssp. japonica HOM05D007279 ORTHO05D009212 2.3e-53 213.0 142 68.3
SEGI_28724 Sequoiadendron giganteum HOM05D007279 ORTHO05D009212 1.8e-50 203.4 136 70.6
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 5.3e-50 201.8 131 73.3
FAN15G0564 Fragaria x ananassa HOM05D000237 ORTHO05D006530 6.9e-50 201.4 211 55.9
Zm00001eb075370 Zea mays HOM05D007279 ORTHO05D009212 7.6e-49 198.0 189 55.0
Potri.002G077600 Populus trichocarpa HOM05D007279 ORTHO05D009212 1.4e-47 193.7 174 60.9
CBR_g26037 Chara braunii HOM05D007279 ORTHO05D009212 1.3e-43 180.6 128 63.3
SMO339G0044 Selaginella moellendorffii HOM05D007279 ORTHO05D009212 9.0e-42 174.5 133 63.2
Pp3c1_14910 Physcomitrium patens HOM05D007279 ORTHO05D009212 7.6e-41 171.4 173 53.2
Mapoly0063s0013 Marchantia polymorpha HOM05D007279 ORTHO05D009212 3.6e-38 162.5 122 61.5
AagrBONN_evm.TU.Sc2ySwM_344.1177 Anthoceros agrestis HOM05D007279 ORTHO05D009212 3.3e-36 156.0 130 58.5
TPR.G6347 Trifolium pratense HOM05D007279 ORTHO05D009212 1.3e-35 154.1 87 79.3
Thecc.08G133700 Theobroma cacao HOM05D007279 ORTHO05D009212 4.8e-35 152.1 152 57.2
vmacro17338 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 7.7e-33 144.8 183 50.3
TAR623G1519 Trochodendron aralioides HOM05D007279 ORTHO05D009212 1.5e-28 130.6 124 54.0
SalBow7G1271 Salvia bowleyana HOM05D007279 ORTHO05D009212 9.1e-26 121.3 158 46.2
vmacro17312 Vaccinium macrocarpon HOM05D007279 ORTHO05D009212 1.2e-25 120.9 114 59.6
Zm00001eb427570 Zea mays HOM05D007279 ORTHO05D009212 1.0e-21 107.8 74 64.9
Oeu047171.1 Olea europaea HOM05D004195 ORTHO05D005309 3.5e-09 66.2 95 43.2


User provided reference genes

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