Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 2.2e-89 332.4 187 100.0
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.3e-73 280.0 189 86.2
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 2.8e-68 262.3 190 80.5
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 6.3e-68 261.2 193 80.8
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 8.8e-62 240.7 189 74.6
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 3.1e-59 232.3 184 75.5
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 9.4e-56 220.7 189 70.9
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 3.0e-54 215.7 189 68.3
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 5.2e-54 214.9 189 68.8
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 2.2e-52 209.5 189 67.7
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 2.2e-52 209.5 189 67.7
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.0e-49 200.7 172 68.6
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 3.2e-48 195.7 190 65.3
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 2.7e-47 192.6 191 66.5
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 2.7e-47 192.6 191 66.5
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 8.0e-47 191.0 190 65.3
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 2.3e-41 172.9 190 61.1
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 7.8e-34 147.9 176 53.4
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.3e-32 142.1 169 52.7
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 4.3e-32 142.1 170 50.6
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 5.6e-32 141.7 170 50.6
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 1.2e-31 140.6 171 53.2
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.6e-31 140.2 170 50.6
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 2.1e-31 139.8 176 51.1
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 3.1e-30 136.0 176 49.4
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 1.2e-29 134.0 171 48.5
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 3.7e-28 129.0 181 47.5
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 3.7e-28 129.0 176 44.9
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 3.7e-28 129.0 178 48.9
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 6.4e-28 128.3 179 49.2
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 6.4e-28 128.3 169 50.3
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 8.3e-28 127.9 186 47.8
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.1e-27 127.5 182 47.3
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 2.4e-27 126.3 174 47.1
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.4e-27 126.3 183 46.4
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 5.4e-27 125.2 177 46.3
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 5.4e-27 125.2 183 47.5
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 7.0e-27 124.8 182 50.0
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 7.0e-27 124.8 183 47.0
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 9.2e-27 124.4 183 45.9
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 9.2e-27 124.4 176 46.0
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.2e-26 124.0 179 46.4
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 2.7e-26 122.9 183 45.9
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 7.8e-26 121.3 181 47.5
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 1.7e-25 120.2 183 45.9
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 3.0e-25 119.4 178 48.3
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 5.0e-25 118.6 184 44.6
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 8.6e-25 117.9 179 43.6
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 1.1e-24 117.5 184 45.1
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 1.9e-24 116.7 181 48.1
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 3.3e-24 115.9 177 44.6
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 5.6e-24 115.2 177 42.4
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.2e-23 114.0 182 45.6
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 1.2e-23 114.0 177 45.2
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 1.6e-23 113.6 177 45.2
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.1e-23 113.2 183 43.7
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 3.6e-23 112.5 179 45.3
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 3.6e-23 112.5 182 42.3
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 6.2e-23 111.7 183 43.7
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 6.2e-23 111.7 179 44.1
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 6.2e-23 111.7 173 42.2
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 6.2e-23 111.7 195 41.5
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 8.1e-23 111.3 187 47.1
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 8.1e-23 111.3 176 43.2
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 8.1e-23 111.3 173 46.8
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.1e-22 110.9 173 46.2
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 1.4e-22 110.5 177 44.6
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.8e-22 110.2 136 50.0
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.3e-22 109.8 183 43.2
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.2e-21 107.5 180 43.3
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.5e-21 107.1 183 45.4
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 2.0e-21 106.7 173 46.2
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 2.0e-21 106.7 176 42.0
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 2.6e-21 106.3 163 45.4
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 2.6e-21 106.3 179 44.1
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 4.4e-21 105.5 248 37.1
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 7.5e-21 104.8 184 42.9
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 1.3e-20 104.0 177 41.2
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 2.2e-20 103.2 144 46.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 2.2e-20 103.2 217 39.6
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 2.9e-20 102.8 179 41.9
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 3.7e-20 102.4 58 87.9
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 8.3e-20 101.3 174 42.0
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.1e-19 100.9 175 44.0
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 1.1e-19 100.9 169 42.6
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 7.1e-19 98.2 148 43.2
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 2.7e-18 96.3 182 39.6
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 3.0e-17 92.8 146 46.6
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.0e-17 92.8 168 43.5
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 3.0e-17 92.8 178 41.0
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.1e-16 90.9 177 37.9
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.9e-16 90.1 201 37.3
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 4.3e-16 89.0 187 39.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 9.5e-16 87.8 184 38.6
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 4.7e-15 85.5 166 36.1
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 3.1e-14 82.8 178 37.1
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 4.0e-14 82.4 176 36.9
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 5.2e-14 82.0 96 53.1
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 3.4e-13 79.3 187 38.0
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.3e-12 77.4 174 35.1
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.9e-12 76.3 179 36.9
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.9e-11 73.6 143 42.7
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 9.2e-11 71.2 176 36.9
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 2.7e-10 69.7 228 32.5
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 1.7e-09 67.0 179 32.4
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 8.6e-09 64.7 96 43.8
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.1e-08 64.3 96 42.7
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 1.5e-08 63.9 136 40.4
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 3.3e-08 62.8 113 47.8
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 3.3e-08 62.8 113 47.8
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 3.3e-08 62.8 77 48.1
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 4.3e-08 62.4 86 45.3
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 3.1e-06 56.2 71 49.3
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 6.8e-06 55.1 95 35.8


User provided reference genes

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