Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 2.4e-41 171.8 88 100.0
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 3.9e-36 154.5 89 91.0
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 1.9e-35 152.1 89 88.8
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 1.9e-35 152.1 89 89.9
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.6e-34 149.1 89 87.6
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.6e-34 149.1 89 87.6
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 2.8e-34 148.3 89 87.6
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 3.7e-34 147.9 89 86.5
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 4.8e-34 147.5 89 86.5
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 4.0e-33 144.4 89 84.3
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 6.9e-33 143.7 89 84.3
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.4e-32 141.4 89 83.1
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.9e-30 135.6 85 78.8
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 7.1e-30 133.7 85 77.6
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 1.6e-29 132.5 88 75.0
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.6e-29 132.5 88 76.1
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 2.1e-29 132.1 88 77.3
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 2.1e-29 132.1 85 77.6
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 77.6
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 2.7e-29 131.7 88 76.1
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 2.7e-29 131.7 85 77.6
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 2.7e-29 131.7 88 76.1
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 6.0e-29 130.6 88 73.9
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 6.0e-29 130.6 87 75.9
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 1.0e-28 129.8 83 79.5
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.0e-28 129.8 88 75.0
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.0e-28 129.8 88 73.9
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.3e-28 129.4 88 73.9
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.8e-28 129.0 83 78.3
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 2.3e-28 128.6 88 72.7
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.3e-28 128.6 88 73.9
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 3.0e-28 128.3 86 73.3
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 3.9e-28 127.9 88 73.9
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 3.9e-28 127.9 88 72.7
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.9e-28 127.9 88 75.0
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 5.1e-28 127.5 88 73.9
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 6.7e-28 127.1 87 72.4
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 8.7e-28 126.7 84 75.0
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 1.1e-27 126.3 88 77.3
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 1.1e-27 126.3 83 75.9
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 1.1e-27 126.3 88 72.7
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.5e-27 125.9 88 72.7
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.5e-27 125.9 88 72.7
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.9e-27 125.6 80 76.2
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 2.5e-27 125.2 88 73.9
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.5e-27 125.2 88 68.2
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 2.5e-27 125.2 80 78.8
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.3e-27 124.8 80 77.5
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 5.6e-27 124.0 80 78.8
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 5.6e-27 124.0 80 78.8
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 5.6e-27 124.0 84 72.6
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 1.3e-26 122.9 84 75.0
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 1.3e-26 122.9 84 75.0
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 1.3e-26 122.9 87 69.0
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.3e-26 122.9 88 69.3
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 1.6e-26 122.5 88 67.0
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.1e-26 122.1 80 76.2
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 3.7e-26 121.3 85 70.6
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 4.8e-26 120.9 88 71.6
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 8.2e-26 120.2 85 70.6
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.4e-25 119.4 91 68.1
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 1.4e-25 119.4 88 70.5
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 4.0e-25 117.9 85 68.2
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 4.0e-25 117.9 85 68.2
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 5.3e-25 117.5 85 68.2
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 6.9e-25 117.1 88 68.2
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 9.0e-25 116.7 84 71.4
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 9.0e-25 116.7 81 75.3
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.4e-24 114.8 86 67.4
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.3e-23 112.8 86 68.6
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.7e-23 112.5 86 66.3
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 2.2e-23 112.1 89 66.3
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 2.2e-23 112.1 82 68.3
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 2.2e-23 112.1 89 66.3
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.4e-22 109.4 87 66.7
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 1.9e-22 109.0 71 76.1
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 3.2e-22 108.2 73 74.0
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 4.2e-22 107.8 75 72.0
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 9.3e-22 106.7 88 62.5
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 2.7e-21 105.1 71 74.6
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.0e-20 103.2 88 61.4
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 1.8e-20 102.4 84 61.9
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 3.9e-20 101.3 83 63.9
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.1e-19 99.8 82 65.9
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.1e-19 99.8 68 72.1
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 9.7e-19 96.7 72 62.5
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 9.7e-19 96.7 81 64.2
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 2.8e-18 95.1 68 69.1
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 3.7e-18 94.7 72 62.5
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 8.2e-18 93.6 74 71.6
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.8e-17 92.4 76 68.4
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.8e-17 92.4 60 76.7
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 2.4e-17 92.0 63 74.6
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 9.0e-17 90.1 82 59.8
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 3.4e-16 88.2 74 62.2
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.0e-15 86.7 55 80.0
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 2.2e-15 85.5 80 55.0
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 2.2e-15 85.5 61 70.5
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 2.9e-15 85.1 80 56.2
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 4.6e-13 77.8 63 65.1
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 5.1e-12 74.3 87 50.6
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 6.7e-12 73.9 48 75.0
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 6.7e-12 73.9 74 54.1
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 4.3e-11 71.2 51 62.7
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 3.7e-10 68.2 78 48.7
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 4.1e-09 64.7 57 61.4
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 1.2e-08 63.2 88 48.9
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 1.1e-06 56.6 80 40.0


User provided reference genes

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