Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G35905 Arabidopsis thaliana HOM05D007707 ORTHO05D009711 9.1e-37 156.4 78 100.0
AL7G15140 Arabidopsis lyrata HOM05D007707 ORTHO05D009711 2.6e-36 154.8 78 98.7
BolC7t46567H Brassica oleracea HOM05D007707 ORTHO05D009711 9.4e-34 146.4 77 92.2
Carub.0007s0432 Capsella rubella HOM05D007707 ORTHO05D009711 2.1e-33 145.2 78 94.9
CARHR244300 Cardamine hirsuta HOM05D007707 ORTHO05D009711 2.1e-33 145.2 78 96.2
Sp7g33690 Schrenkiella parvula HOM05D007707 ORTHO05D009711 2.1e-33 145.2 78 93.6
A03p63940 Brassica napus HOM05D007707 ORTHO05D009711 2.7e-33 144.8 77 89.6
BraA03t15463Z Brassica rapa HOM05D007707 ORTHO05D009711 2.7e-33 144.8 77 89.6
Aa31LG6G12850 Aethionema arabicum HOM05D007707 ORTHO05D009711 1.2e-31 139.4 78 89.7
Thhalv10026722m.g Eutrema salsugineum HOM05D007707 ORTHO05D009711 6.3e-30 133.7 78 88.5
THA.LOC104804277 Tarenaya hassleriana HOM05D007707 ORTHO05D009711 3.5e-28 127.9 80 83.8
BcaNung05054 Brassica carinata HOM05D007707 ORTHO05D009711 3.8e-27 124.4 78 82.1
Ah.02g123290 Amaranthus hybridus HOM05D007707 ORTHO05D009711 7.2e-26 120.2 75 77.3
Manes.01G149600 Manihot esculenta HOM05D007707 ORTHO05D009711 9.4e-26 119.8 73 76.7
CANSAT01G1439 Cannabis sativa HOM05D007707 ORTHO05D009711 1.6e-25 119.0 75 74.7
TWI73G0967 Tripterygium wilfordii HOM05D007707 ORTHO05D009711 3.6e-25 117.9 71 76.1
CiPaw.07G061600 Carya illinoinensis HOM05D007707 ORTHO05D009711 1.8e-24 115.5 76 75.0
Prupe.7G172900 Prunus persica HOM05D007707 ORTHO05D009711 2.3e-24 115.2 73 78.1
Hma1.2p1_0869F.1_g230620 Hydrangea macrophylla HOM05D007707 ORTHO05D009711 4.0e-24 114.4 76 73.7
EL10Ac6g15163 Beta vulgaris HOM05D007707 ORTHO05D009711 5.2e-24 114.0 74 74.3
Thecc.01G013500 Theobroma cacao HOM05D007707 ORTHO05D009711 6.8e-24 113.6 69 79.7
Ciclev10026827m.g Citrus clementina HOM05D007707 ORTHO05D009711 1.5e-23 112.5 77 70.1
Haze_03717 Corylus avellana HOM05D007707 ORTHO05D009711 1.5e-23 112.5 71 74.6
Cfa007014 Carpinus fangiana HOM05D007707 ORTHO05D009711 2.6e-23 111.7 76 73.7
vmacro22198 Vaccinium macrocarpon HOM05D007707 ORTHO05D009711 4.4e-23 110.9 71 73.2
COL.COLO4_22472 Corchorus olitorius HOM05D007707 ORTHO05D009711 5.7e-23 110.5 73 72.6
AUR62018017 Chenopodium quinoa HOM05D007707 ORTHO05D009711 7.5e-23 110.2 72 73.6
Duzib147G0406 Durio zibethinus HOM05D007707 ORTHO05D009711 1.3e-22 109.4 71 71.8
MELO3C007931.2 Cucumis melo HOM05D007707 ORTHO05D009711 1.7e-22 109.0 76 67.1
Gohir.A11G173000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 1.7e-22 109.0 71 73.2
Cc07_g11150 Coffea canephora HOM05D007707 ORTHO05D009711 2.2e-22 108.6 71 71.8
ClCG01G020510 Citrullus lanatus HOM05D007707 ORTHO05D009711 3.7e-22 107.8 71 66.2
Gohir.D11G180000 Gossypium hirsutum HOM05D007707 ORTHO05D009711 3.7e-22 107.8 71 71.8
Gorai.007G191900 Gossypium raimondii HOM05D007707 ORTHO05D009711 3.7e-22 107.8 71 71.8
Rhsim10G0207600 Rhododendron simsii HOM05D007707 ORTHO05D009711 3.7e-22 107.8 69 72.5
Dinv08562 Davidia involucrata HOM05D007707 ORTHO05D009711 4.9e-22 107.5 76 73.7
MD15G1241100 Malus domestica HOM05D007707 ORTHO05D009711 8.3e-22 106.7 71 73.2
Glyma.11G079800 Glycine max HOM05D007707 ORTHO05D009711 1.1e-21 106.3 76 71.1
CsaV3_6G047390 Cucumis sativus L. HOM05D007707 ORTHO05D009711 1.8e-21 105.5 76 65.8
QL06p051322 Quercus lobata HOM05D007707 ORTHO05D009711 1.8e-21 105.5 71 70.4
Glyma.01G163700 Glycine max HOM05D007707 ORTHO05D009711 4.1e-21 104.4 76 67.1
Phvul.002G105900 Phaseolus vulgaris HOM05D007707 ORTHO05D009711 7.0e-21 103.6 76 68.4
Nitab4.5_0001561g0120 Nicotiana tabacum HOM05D007707 ORTHO05D009711 1.6e-20 102.4 71 69.0
PGR102G1942 Punica granatum HOM05D007707 ORTHO05D009711 1.6e-20 102.4 69 73.9
Sc16g0001900 Simmondsia chinensis HOM05D007707 ORTHO05D009711 1.6e-20 102.4 71 70.4
RcHm_v2.0_Chr2g0098761 Rosa chinensis HOM05D007707 ORTHO05D009711 2.0e-20 102.1 71 67.6
Sed0012149 Sechium edule HOM05D007707 ORTHO05D009711 2.0e-20 102.1 78 66.7
FAN19G0536 Fragaria x ananassa HOM05D007707 ORTHO05D009711 3.5e-20 101.3 64 71.9
Nitab4.5_0001685g0100 Nicotiana tabacum HOM05D007707 ORTHO05D009711 3.5e-20 101.3 71 69.0
Nn6g31960 Nelumbo nucifera HOM05D007707 ORTHO05D009711 5.9e-20 100.5 71 70.4
FAN28G2511 Fragaria x ananassa HOM05D007707 ORTHO05D009711 7.7e-20 100.1 64 70.3
TPR.G10525 Trifolium pratense HOM05D007707 ORTHO05D009711 7.7e-20 100.1 76 64.5
Sabra15G0015600 Salix brachista HOM05D007707 ORTHO05D009711 1.3e-19 99.4 65 72.3
FAN23G0755 Fragaria x ananassa HOM05D007707 ORTHO05D009711 2.3e-19 98.6 60 75.0
MBI08_g05062_MAGBIO Magnolia biondii HOM05D007707 ORTHO05D009711 2.3e-19 98.6 76 63.2
Migut.J01748 Erythranthe guttata HOM05D007707 ORTHO05D009711 2.9e-19 98.2 74 66.2
Lsat_1_v5_gn_3_71080 Lactuca sativa HOM05D007707 ORTHO05D009711 2.9e-19 98.2 58 77.6
Peaxi162Scf00635g00914 Petunia axillaris HOM05D007707 ORTHO05D009711 5.0e-19 97.4 75 66.7
ECA246G5216 Erigeron canadensis HOM05D007707 ORTHO05D009711 6.6e-19 97.1 71 67.6
CAN.G354.55 Capsicum annuum HOM05D007707 ORTHO05D009711 8.6e-19 96.7 71 67.6
Medtr5g022760 Medicago truncatula HOM05D007707 ORTHO05D009711 8.6e-19 96.7 76 61.8
Sopen03g006140 Solanum pennellii HOM05D007707 ORTHO05D009711 8.6e-19 96.7 75 68.0
Lj2g0020635 Lotus japonicus HOM05D007707 ORTHO05D009711 1.1e-18 96.3 74 58.1
Solyc03g033370.3 Solanum lycopersicum HOM05D007707 ORTHO05D009711 1.1e-18 96.3 75 66.7
Psat2g152640 Pisum sativum HOM05D007707 ORTHO05D009711 1.5e-18 95.9 77 62.3
arahy.Tifrunner.gnm1.ann1.LEB2TA Arachis hypogaea HOM05D007707 ORTHO05D009711 1.2e-17 92.8 62 69.4
arahy.Tifrunner.gnm1.ann1.URRP40 Arachis hypogaea HOM05D007707 ORTHO05D009711 1.2e-17 92.8 62 69.4
Lalb_Chr09g0321541 Lupinus albus HOM05D007707 ORTHO05D009711 2.1e-17 92.0 66 65.2
Oeu056393.1 Olea europaea HOM05D007707 ORTHO05D009711 3.6e-17 91.3 71 59.2
CDE05G2854 Ceratophyllum demersum HOM05D007707 ORTHO05D009711 1.0e-16 89.7 82 59.8
DCAR_011610 Daucus carota HOM05D007707 ORTHO05D009711 1.4e-16 89.4 71 62.0
C07p61410 Brassica napus HOM05D007707 ORTHO05D009711 2.3e-16 88.6 42 97.6
SGA_v2.0_scaffold36G14291 Striga asiatica HOM05D007707 ORTHO05D009711 3.0e-16 88.2 72 62.5
Actinidia22948 Actinidia chinensis HOM05D007707 ORTHO05D009711 8.9e-16 86.7 60 71.7
Os10g0438700 Oryza sativa ssp. japonica HOM05D007707 ORTHO05D009711 8.9e-16 86.7 61 63.9
Zm00001eb222710 Zea mays HOM05D007707 ORTHO05D009711 2.0e-15 85.5 71 56.3
arahy.Tifrunner.gnm1.ann1.04LXIS Arachis hypogaea HOM05D000001 ORTHO05D009700 9.8e-15 83.2 56 67.9
Pp3c14_18830 Physcomitrium patens HOM05D007707 ORTHO05D009711 3.7e-14 81.3 81 50.6
ATR0180G024 Amborella trichopoda HOM05D007707 ORTHO05D009711 8.3e-14 80.1 59 61.0
GSVIVG01006523001 Vitis vinifera HOM05D007707 ORTHO05D009711 2.4e-13 78.6 53 71.7
Hund14067 Selenicereus undatus HOM05D007707 ORTHO05D009711 7.0e-13 77.0 54 68.5
Mapoly0124s0029 Marchantia polymorpha HOM05D007707 ORTHO05D009711 1.7e-11 72.4 62 53.2
PGSC0003DMG400022552 Solanum tuberosum HOM05D007707 ORTHO05D009711 2.3e-11 72.0 52 69.2
Eucgr.J02480 Eucalyptus grandis HOM05D007707 ORTHO05D009711 8.6e-11 70.1 58 62.1
FvH4_1g11290 Fragaria vesca HOM05D007707 ORTHO05D009711 1.1e-10 69.7 46 67.4
SEGI_22054 Sequoiadendron giganteum HOM05D007707 ORTHO05D009711 7.3e-10 67.0 56 50.0
HanXRQChr09g0245181 Helianthus annuus HOM05D007707 ORTHO05D009711 6.2e-09 63.9 52 63.5
HPP92_020736 Vanilla planifolia HOM05D007707 ORTHO05D009711 6.8e-08 60.5 52 55.8
SalBow2G3201 Salvia bowleyana HOM05D007707 ORTHO05D009711 8.9e-08 60.1 42 64.3
CSS0044701 Camellia sinensis var. sinensis HOM05D007707 ORTHO05D009711 2.0e-07 58.9 36 63.9
Oeu060284.1 Olea europaea HOM05D007707 ORTHO05D009711 2.2e-06 55.5 70 47.1


User provided reference genes

Program Settings