Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G35783 Arabidopsis thaliana HOM05D008941 ORTHO05D010842 4.8e-28 127.1 63 100.0
AL7G15310 Arabidopsis lyrata HOM05D008941 ORTHO05D010842 1.9e-24 115.2 63 95.2
CARHR244140 Cardamine hirsuta HOM05D008941 ORTHO05D010842 1.6e-23 112.1 63 92.1
Sp7g33560 Schrenkiella parvula HOM05D008941 ORTHO05D010842 1.0e-22 109.4 64 92.2
C01p03270 Brassica napus HOM05D008941 ORTHO05D010842 6.7e-22 106.7 64 85.9
A01p02930 Brassica napus HOM05D008941 ORTHO05D010842 8.7e-22 106.3 63 84.1
BraA01t00276Z Brassica rapa HOM05D008941 ORTHO05D010842 8.7e-22 106.3 63 84.1
BolC1t00313H Brassica oleracea HOM05D008941 ORTHO05D010842 5.7e-21 103.6 63 82.5
C07p61340 Brassica napus HOM05D008941 ORTHO05D010842 9.6e-21 102.8 63 84.1
BolC7t46560H Brassica oleracea HOM05D008941 ORTHO05D010842 9.6e-21 102.8 63 84.1
BcaNung04354 Brassica carinata HOM05D008941 ORTHO05D010842 4.8e-20 100.5 63 82.5
BraA03t15456Z Brassica rapa HOM05D008941 ORTHO05D010842 6.3e-20 100.1 63 82.5
BcaNung04352 Brassica carinata HOM05D008941 ORTHO05D010842 1.8e-19 98.6 64 82.8
BcaNung05046 Brassica carinata HOM05D008941 ORTHO05D010842 1.8e-19 98.6 64 82.8
Carub.0007s0446 Capsella rubella HOM05D008941 ORTHO05D010842 1.9e-16 88.6 64 76.6
THA.LOC109116896 Tarenaya hassleriana HOM05D008941 ORTHO05D010842 5.3e-11 70.5 59 64.4
COL.COLO4_22503 Corchorus olitorius HOM05D008941 ORTHO05D010842 6.9e-11 70.1 68 55.9
Thecc.01G010500 Theobroma cacao HOM05D008941 ORTHO05D010842 2.0e-10 68.6 65 61.5
Sed0000767 Sechium edule HOM05D008941 ORTHO05D010842 9.4e-08 59.7 61 52.5
Prupe.7G175900 Prunus persica HOM05D008941 ORTHO05D010842 2.7e-07 58.2 30 73.3
FAN23G1674 Fragaria x ananassa HOM05D008941 ORTHO05D010842 4.6e-07 57.4 39 59.0
Lj2g0015207 Lotus japonicus HOM05D008941 ORTHO05D010842 4.6e-07 57.4 59 49.2
Medtr5g023120 Medicago truncatula HOM05D008941 ORTHO05D010842 6.1e-07 57.0 61 50.8
Nn1g07145 Nelumbo nucifera HOM05D008941 ORTHO05D010842 1.0e-06 56.2 63 49.2
Gohir.A05G170700 Gossypium hirsutum HOM05D008941 ORTHO05D010842 1.8e-06 55.5 64 53.1
Mapoly0151s0015 Marchantia polymorpha HOM05D008941 ORTHO05D010842 1.8e-06 55.5 69 47.8
MD02G1122600 Malus domestica HOM05D008941 ORTHO05D010842 2.3e-06 55.1 30 70.0
RcHm_v2.0_Chr2g0098221 Rosa chinensis HOM05D008941 ORTHO05D010842 3.0e-06 54.7 62 53.2
Phvul.001G233300 Phaseolus vulgaris HOM05D001415 ORTHO05D001075 5.1e-06 53.9 32 62.5
Thecc.06G221500 Theobroma cacao HOM05D008941 ORTHO05D010842 8.8e-06 53.1 60 50.0


User provided reference genes

Program Settings