Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 2.4e-70 268.9 147 100.0
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 1.8e-65 252.7 149 91.9
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 4.8e-63 244.6 148 93.2
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 4.2e-59 231.5 153 85.0
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 2.7e-58 228.8 150 85.3
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.4e-57 226.5 151 87.4
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 1.3e-55 219.9 151 84.8
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.7e-55 219.5 151 84.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.7e-55 219.5 151 84.8
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.8e-55 218.8 151 82.8
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.8e-55 218.8 151 82.8
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 3.8e-52 208.4 149 77.9
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 3.8e-44 181.8 149 69.8
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.7e-42 174.9 149 67.8
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.0e-33 147.1 144 63.9
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 2.3e-33 146.0 118 70.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 3.0e-33 145.6 148 60.8
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 4.0e-33 145.2 150 59.3
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 6.7e-33 144.4 145 60.0
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 8.8e-33 144.1 147 60.5
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 8.8e-33 144.1 149 59.1
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 2.0e-32 142.9 147 59.2
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 2.6e-32 142.5 149 59.7
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 7.5e-32 141.0 147 58.5
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 7.5e-32 141.0 150 57.3
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 9.7e-32 140.6 149 57.7
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 9.7e-32 140.6 148 56.8
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.7e-31 139.8 149 57.7
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 2.2e-31 139.4 147 58.5
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.2e-31 139.4 146 56.8
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 2.8e-31 139.0 149 59.1
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 3.7e-31 138.7 149 58.4
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 3.7e-31 138.7 151 57.0
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 4.8e-31 138.3 147 58.5
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 4.8e-31 138.3 151 57.0
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 8.2e-31 137.5 149 57.7
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 8.2e-31 137.5 146 54.1
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 8.2e-31 137.5 149 59.1
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 1.1e-30 137.1 150 54.7
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.1e-30 137.1 147 53.7
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 1.4e-30 136.7 148 56.8
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 3.1e-30 135.6 149 57.7
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 4.1e-30 135.2 148 57.4
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 5.3e-30 134.8 145 57.2
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 5.3e-30 134.8 147 58.5
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 7.0e-30 134.4 147 57.8
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 7.0e-30 134.4 148 55.4
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 9.1e-30 134.0 147 55.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 1.2e-29 133.7 128 60.2
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.2e-29 133.7 151 55.6
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.2e-29 133.7 104 71.2
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 1.6e-29 133.3 146 54.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 2.0e-29 132.9 147 55.1
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 2.7e-29 132.5 148 57.4
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.9e-29 131.3 147 53.7
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 7.7e-29 131.0 148 56.8
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 7.7e-29 131.0 147 55.1
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 1.0e-28 130.6 147 56.5
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.3e-28 130.2 149 53.0
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.7e-28 129.8 151 55.6
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.7e-28 129.8 152 54.6
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 2.2e-28 129.4 147 54.4
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 2.2e-28 129.4 147 55.1
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.9e-28 129.0 152 55.9
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.9e-28 129.0 147 53.7
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 2.9e-28 129.0 148 56.8
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 2.9e-28 129.0 147 53.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 3.8e-28 128.6 146 52.7
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 5.0e-28 128.3 152 54.6
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 5.0e-28 128.3 141 56.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 8.5e-28 127.5 106 67.0
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 1.1e-27 127.1 146 52.7
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 1.5e-27 126.7 148 54.7
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.5e-27 126.7 109 67.0
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 4.2e-27 125.2 147 53.7
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 7.2e-27 124.4 104 67.3
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 7.2e-27 124.4 147 54.4
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 9.4e-27 124.0 147 53.7
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 9.4e-27 124.0 131 57.3
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 9.4e-27 124.0 153 55.6
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 9.4e-27 124.0 151 54.3
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.6e-26 123.2 105 68.6
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 2.1e-26 122.9 149 53.0
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 3.6e-26 122.1 131 56.5
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.7e-26 121.7 145 49.7
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 1.4e-25 120.2 172 47.7
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 3.0e-25 119.0 142 50.0
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 3.0e-25 119.0 106 61.3
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.2e-24 117.1 144 51.4
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.5e-24 116.7 133 51.1
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 2.0e-24 116.3 93 65.6
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.6e-24 115.9 93 66.7
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 3.4e-24 115.5 79 73.4
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 4.4e-24 115.2 82 73.2
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 9.8e-24 114.0 123 56.1
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 6.3e-23 111.3 134 50.7
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.4e-22 110.2 134 49.3
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 1.8e-22 109.8 163 46.0
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 2.5e-19 99.4 69 78.3
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.6e-18 96.7 113 50.4
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.6e-18 96.7 107 48.6
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 8.9e-17 90.9 122 49.2
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.5e-16 90.1 77 62.3
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.5e-16 90.1 113 51.3
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 1.3e-15 87.0 133 42.1
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 6.3e-15 84.7 115 46.1
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 4.1e-14 82.0 86 50.0
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 2.7e-13 79.3 159 37.7
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 4.5e-13 78.6 55 74.5
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 5.9e-13 78.2 82 50.0
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 7.8e-13 77.8 142 39.4
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 2.5e-11 72.8 87 48.3
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 5.6e-11 71.6 113 42.5
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 5.2e-09 65.1 76 57.9
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 4.4e-08 62.0 107 39.3
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.9e-06 56.6 61 49.2
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 2.4e-06 56.2 34 79.4


User provided reference genes

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