Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G33145 Arabidopsis thaliana HOM05D009632 ORTHO05D011780 1.1e-24 115.9 65 100.0
AL7G18420 Arabidopsis lyrata HOM05D009632 ORTHO05D011780 4.3e-16 87.4 64 85.9
BcaC09g52121 Brassica carinata HOM05D009632 ORTHO05D011780 3.2e-11 71.2 63 65.1
C01p05490 Brassica napus HOM05D009632 ORTHO05D011780 7.2e-11 70.1 63 65.1
BolC1t00529H Brassica oleracea HOM05D009632 ORTHO05D011780 7.2e-11 70.1 63 65.1
BcaC09g52120 Brassica carinata HOM05D009632 ORTHO05D011780 9.3e-11 69.7 66 63.6
A01p05040 Brassica napus HOM05D009632 ORTHO05D011780 1.2e-10 69.3 63 63.5
BraA01t00486Z Brassica rapa HOM05D009632 ORTHO05D011780 1.2e-10 69.3 63 63.5
A01p05030 Brassica napus HOM05D009632 ORTHO05D011780 1.6e-10 68.9 60 65.0
BraA01t00485Z Brassica rapa HOM05D009632 ORTHO05D011780 1.6e-10 68.9 60 65.0
BcaC09g52119 Brassica carinata HOM05D009632 ORTHO05D011780 2.7e-10 68.2 63 63.5
C01p05480 Brassica napus HOM05D009632 ORTHO05D011780 2.7e-10 68.2 63 61.9
BolC1t00528H Brassica oleracea HOM05D009632 ORTHO05D011780 2.7e-10 68.2 63 61.9
Sp7g30890 Schrenkiella parvula HOM05D009632 ORTHO05D011780 4.6e-10 67.4 63 63.5
A01p05050 Brassica napus HOM05D009632 ORTHO05D011780 2.3e-09 65.1 63 63.5
C01p05530 Brassica napus HOM05D009632 ORTHO05D011780 2.3e-09 65.1 63 61.9
BraA01t00487Z Brassica rapa HOM05D009632 ORTHO05D011780 2.3e-09 65.1 63 63.5
A01p05060 Brassica napus HOM05D009632 ORTHO05D011780 3.0e-09 64.7 63 58.7
BraA01t00488Z Brassica rapa HOM05D009632 ORTHO05D011780 3.0e-09 64.7 63 58.7
CARHR241170 Cardamine hirsuta HOM05D009632 ORTHO05D011780 5.1e-09 63.9 41 78.0
C01p05510 Brassica napus HOM05D009632 ORTHO05D011780 8.7e-09 63.2 63 61.9
C01p05520 Brassica napus HOM05D009632 ORTHO05D011780 8.7e-09 63.2 63 58.7
BolC1t00532H Brassica oleracea HOM05D009632 ORTHO05D011780 8.7e-09 63.2 63 58.7
BolC1t00533H Brassica oleracea HOM05D009632 ORTHO05D011780 1.9e-08 62.0 63 60.3
Sp7g09720 Schrenkiella parvula HOM05D009632 ORTHO05D011780 3.3e-08 61.2 63 58.7
BolC1t00531H Brassica oleracea HOM05D009632 ORTHO05D011780 4.3e-08 60.8 63 60.3
AL3G53090 Arabidopsis lyrata HOM05D009632 ORTHO05D011780 6.3e-07 57.0 64 64.1


User provided reference genes

Program Settings