Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 5.1e-165 584.3 294 100.0
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 5.1e-157 557.8 294 95.2
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 6.7e-157 557.4 294 96.9
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 4.8e-155 551.2 295 95.3
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 3.1e-154 548.5 294 94.2
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 5.3e-154 547.7 295 92.2
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 1.2e-153 546.6 295 92.2
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 4.5e-153 544.7 295 92.5
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 4.5e-153 544.7 295 92.5
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 8.4e-152 540.4 295 91.5
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 3.2e-151 538.5 294 92.5
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 4.3e-140 501.5 295 86.8
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.5e-136 487.6 294 84.7
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.1e-124 450.3 295 77.3
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.5e-124 449.9 295 77.3
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.1e-122 441.8 295 76.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 7.0e-122 441.0 293 78.2
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 9.1e-122 440.7 294 74.8
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 3.5e-121 438.7 292 74.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.3e-120 436.8 295 73.6
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.2e-120 436.0 295 73.9
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 8.5e-120 434.1 295 75.6
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 1.5e-119 433.3 294 75.9
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.5e-119 433.3 295 73.2
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 1.9e-119 433.0 292 75.3
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 7.2e-119 431.0 295 73.2
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 9.4e-119 430.6 295 75.3
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 8.8e-117 424.1 292 78.1
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 1.2e-116 423.7 295 73.2
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.5e-116 423.3 293 74.1
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 1.5e-116 423.3 293 74.1
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.3e-115 420.2 293 73.0
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 1.7e-115 419.9 295 73.6
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 3.7e-115 418.7 286 79.4
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 6.3e-115 417.9 308 69.5
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 2.4e-114 416.0 303 70.6
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.1e-114 415.6 281 74.7
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 5.4e-114 414.8 293 72.4
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 5.4e-114 414.8 292 72.6
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.6e-113 413.3 292 73.6
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 2.7e-113 412.5 293 72.4
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 3.5e-113 412.1 295 72.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 4.5e-113 411.8 293 71.0
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 4.5e-113 411.8 308 68.8
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 4.5e-113 411.8 309 68.3
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 1.7e-112 409.8 317 68.5
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.7e-112 409.8 302 69.9
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.0e-112 408.3 294 70.4
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 8.5e-112 407.5 281 73.7
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.5e-111 406.8 312 67.0
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.9e-111 406.4 312 67.3
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 3.2e-111 405.6 293 71.3
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 4.2e-111 405.2 277 74.0
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 7.2e-111 404.4 278 73.4
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 7.2e-111 404.4 277 74.7
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.6e-110 403.3 310 66.5
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.7e-110 402.5 293 69.6
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 4.7e-110 401.7 294 71.8
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 6.1e-110 401.4 297 70.0
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 8.0e-110 401.0 312 67.0
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.0e-109 400.6 294 72.4
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 1.0e-109 400.6 292 70.5
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 1.4e-109 400.2 301 67.8
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.4e-109 400.2 294 70.7
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 1.8e-109 399.8 301 68.1
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 2.3e-109 399.4 296 70.6
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 4.0e-109 398.7 295 69.8
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 5.2e-109 398.3 276 73.2
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 8.8e-109 397.5 295 70.8
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.7e-108 394.8 292 70.9
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 7.5e-108 394.4 298 67.4
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 9.8e-108 394.0 294 70.1
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 9.8e-108 394.0 286 69.6
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.7e-107 393.3 292 70.5
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 2.2e-107 392.9 282 73.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 2.8e-107 392.5 300 67.0
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 8.3e-107 391.0 448 51.6
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.1e-106 390.6 293 68.9
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 1.4e-106 390.2 292 68.2
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.8e-106 389.8 291 68.0
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 4.1e-106 388.7 279 73.1
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.7e-105 386.0 291 69.1
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 2.7e-105 386.0 292 69.2
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 3.5e-105 385.6 371 56.9
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 3.5e-105 385.6 293 67.9
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 5.9e-105 384.8 294 69.0
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 5.9e-105 384.8 293 69.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.0e-104 384.0 295 68.5
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 2.3e-104 382.9 279 72.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-103 380.6 275 69.8
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.5e-103 380.2 292 66.1
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 9.5e-103 377.5 302 64.6
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.8e-102 375.9 291 66.7
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 3.6e-102 375.6 211 87.7
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 3.0e-101 372.5 282 67.7
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.2e-100 370.5 294 68.0
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 3.2e-98 362.5 272 70.2
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.1e-98 362.1 275 65.1
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 2.0e-97 359.8 298 64.8
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 1.6e-94 350.1 254 71.7
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 6.2e-94 348.2 294 64.3
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.8e-93 346.7 285 64.2
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 2.2e-91 339.7 246 71.5
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.2e-86 323.9 257 65.8
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 6.2e-86 321.6 251 72.1
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.8e-85 318.2 204 77.0
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.3e-83 313.9 277 58.8
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.2e-83 313.2 277 58.1
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.9e-82 310.1 200 78.0
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.2e-81 307.4 301 54.5
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 2.0e-76 290.0 248 68.1
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 2.6e-76 289.7 277 59.2
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 3.2e-74 282.7 171 87.1
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 2.1e-73 280.0 294 51.0
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-73 279.6 259 58.3
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.9e-71 273.5 293 53.2
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.6e-71 271.9 293 53.2
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 8.9e-69 264.6 273 50.2
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 5.8e-68 261.9 274 51.1
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 7.6e-68 261.5 264 60.6
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 4.2e-66 255.8 274 50.0
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 1.6e-65 253.8 269 49.8
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 2.3e-64 250.0 271 49.1
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 3.6e-62 242.7 167 73.1
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 5.3e-61 238.8 164 73.2
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 3.8e-59 232.6 167 70.7
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 6.0e-57 225.3 300 44.0
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.1e-56 222.2 275 45.5
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 2.5e-34 150.2 133 56.4
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 5.5e-34 149.1 127 60.6
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.2e-33 147.9 134 59.0
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 4.2e-26 122.9 239 42.7
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 2.2e-19 100.5 126 46.8
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 3.6e-17 93.2 96 52.1
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 2.4e-13 80.5 176 39.2
ATR0326G034 Amborella trichopoda HOM05D005681 ORTHO05D068436 8.2e-06 55.5 65 47.7


User provided reference genes

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