Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.6e-97 359.4 176 100.0
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 8.2e-94 347.1 176 95.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 2.9e-91 338.6 176 93.8
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.1e-90 336.7 176 93.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 1.7e-83 312.8 176 86.9
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 1.9e-82 309.3 176 85.8
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 2.1e-81 305.8 176 84.7
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 2.3e-80 302.4 176 84.7
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 5.2e-80 301.2 176 85.2
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.2e-79 300.1 176 84.1
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.3e-78 296.6 176 82.4
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 9.1e-77 290.4 155 88.4
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 5.9e-76 287.7 153 88.9
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.3e-75 286.6 173 81.5
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.3e-75 286.6 176 80.7
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 2.9e-75 285.4 173 81.5
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 2.9e-75 285.4 176 80.1
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 8.5e-75 283.9 173 79.8
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.5e-74 283.1 173 79.8
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.9e-74 282.7 176 79.0
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 4.2e-74 281.6 176 79.5
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 4.2e-74 281.6 176 79.5
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.4e-74 280.4 172 80.8
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 9.4e-74 280.4 172 80.8
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 9.4e-74 280.4 176 79.5
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 2.1e-73 279.3 172 80.2
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.7e-73 278.9 173 79.2
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 3.6e-73 278.5 172 79.7
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 4.7e-73 278.1 173 78.0
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.0e-72 276.9 171 80.1
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.4e-72 276.6 173 77.5
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 3.0e-72 275.4 172 80.8
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.0e-72 275.0 176 76.7
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 2.0e-71 272.7 176 76.1
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 2.0e-71 272.7 173 78.0
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 2.0e-71 272.7 173 78.0
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 2.6e-71 272.3 173 78.0
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.4e-71 271.9 177 77.4
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 3.4e-71 271.9 173 77.5
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 3.4e-71 271.9 170 77.6
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 4.4e-71 271.6 173 77.5
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 7.5e-71 270.8 173 76.9
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 9.8e-71 270.4 176 74.4
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 9.8e-71 270.4 172 77.3
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.7e-70 269.6 176 76.7
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 2.2e-70 269.2 172 77.3
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.8e-70 268.9 177 76.8
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 2.8e-70 268.9 176 74.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.7e-70 268.5 173 76.3
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 3.7e-70 268.5 171 76.6
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 1.1e-69 266.9 173 78.0
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.4e-69 266.5 170 76.5
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.4e-69 266.5 173 75.1
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.8e-69 266.2 173 76.3
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.4e-69 265.8 172 77.9
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 7.0e-69 264.2 173 75.1
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 9.1e-69 263.8 170 76.5
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 1.2e-68 263.5 174 75.3
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.6e-68 263.1 173 76.3
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 4.5e-68 261.5 174 75.9
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.3e-67 260.0 155 80.0
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 1.3e-67 260.0 160 79.4
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.7e-67 259.6 153 81.0
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.7e-67 259.6 171 74.9
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.7e-67 259.6 171 74.9
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 2.3e-67 259.2 157 80.3
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.9e-67 258.8 170 73.5
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 6.5e-67 257.7 171 76.0
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 8.6e-67 257.3 161 77.0
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 1.9e-66 256.1 171 75.4
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.5e-66 255.8 181 72.4
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 4.2e-66 255.0 170 74.1
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 9.5e-66 253.8 171 74.9
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 9.5e-66 253.8 155 80.0
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.1e-65 252.7 151 79.5
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 3.6e-65 251.9 172 72.7
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 3.6e-65 251.9 171 73.7
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 4.7e-65 251.5 170 74.7
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 8.0e-65 250.8 170 72.9
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 1.0e-64 250.4 171 73.7
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 1.4e-64 250.0 188 68.1
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 2.3e-64 249.2 162 72.8
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 3.0e-64 248.8 169 74.0
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 8.8e-64 247.3 171 72.5
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 1.2e-63 246.9 168 73.2
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 1.5e-63 246.5 157 75.8
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.0e-63 246.1 171 72.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 3.4e-63 245.4 173 72.3
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 1.7e-62 243.0 171 72.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 2.2e-62 242.7 157 75.2
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 8.3e-62 240.7 171 71.3
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 1.4e-61 240.0 176 67.6
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 1.8e-61 239.6 173 71.1
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 2.4e-61 239.2 175 70.9
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.4e-61 239.2 151 76.8
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 5.4e-61 238.0 151 76.2
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 1.2e-60 236.9 174 67.8
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.7e-60 235.7 153 75.2
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 3.5e-60 235.3 171 70.2
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.5e-60 235.0 151 75.5
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 5.9e-60 234.6 170 70.0
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 1.0e-59 233.8 167 69.5
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 1.7e-59 233.0 139 79.1
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 1.7e-59 233.0 139 79.1
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 5.0e-59 231.5 150 73.3
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 5.0e-59 231.5 159 72.3
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.4e-56 223.4 186 61.8
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 5.2e-56 221.5 151 70.9
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.3e-54 216.9 158 67.1
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 4.9e-54 214.9 172 68.0
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 2.7e-52 209.1 134 76.1
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 4.6e-52 208.4 131 77.1
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 5.9e-52 208.0 178 61.2
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 5.9e-52 208.0 154 63.0
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.9e-51 205.3 142 72.5
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 4.3e-50 201.8 319 41.4
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.4e-48 196.8 165 63.0
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.3e-46 190.3 111 79.3
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 8.9e-40 167.5 176 54.5
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 2.7e-36 156.0 311 36.7
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 4.7e-33 145.2 208 44.7
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 4.7e-33 145.2 237 41.4
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 3.5e-28 129.0 84 77.4
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 7.3e-26 121.3 67 85.1
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.8e-24 116.7 82 68.3
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.0e-23 113.2 67 74.6
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 2.6e-23 112.8 79 64.6
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 6.2e-17 91.7 44 86.4
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 8.7e-11 71.2 88 46.6
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.3e-09 67.4 45 75.6
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 3.7e-09 65.9 72 48.6
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.5e-07 58.9 119 32.8
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 7.6e-07 58.2 47 66.0


User provided reference genes

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