Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 4.0e-160 568.2 307 100.0
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 1.1e-138 496.9 303 89.4
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 8.6e-131 470.7 302 85.4
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 3.2e-125 452.2 301 83.4
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 6.0e-124 448.0 303 81.5
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 1.1e-122 443.7 302 80.8
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 2.6e-119 432.6 304 80.3
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.7e-118 429.9 304 80.3
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.9e-117 426.4 304 79.3
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 1.9e-117 426.4 284 83.5
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 5.4e-117 424.9 308 78.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 6.4e-110 401.4 310 73.9
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 5.5e-85 318.5 336 56.2
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.2e-77 292.7 278 57.2
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 2.7e-76 289.7 278 56.8
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.8e-75 287.0 265 60.0
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 3.0e-75 286.2 278 56.1
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 1.1e-72 277.7 279 57.0
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.0e-70 271.2 259 59.5
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 1.3e-70 270.8 289 54.7
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 1.4e-69 267.3 258 57.0
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.9e-69 266.9 283 54.8
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.1e-68 263.5 286 54.9
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 2.7e-68 263.1 239 60.7
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 3.0e-67 259.6 256 57.4
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 5.1e-67 258.8 286 53.1
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 8.7e-67 258.1 260 55.4
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 8.7e-67 258.1 260 55.8
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 1.5e-66 257.3 296 52.7
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.9e-66 256.9 254 58.3
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 2.0e-63 246.9 244 58.2
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 4.5e-63 245.7 254 55.1
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 4.5e-63 245.7 258 54.7
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 7.7e-63 245.0 282 51.4
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 5.0e-62 242.3 266 51.5
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 6.5e-62 241.9 260 52.3
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 8.5e-62 241.5 261 54.0
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 8.5e-62 241.5 250 54.0
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 7.2e-61 238.4 300 46.7
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 6.1e-60 235.3 288 49.7
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.3e-59 233.4 262 50.4
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 3.9e-59 232.6 265 48.3
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 5.1e-59 232.3 279 48.4
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 8.8e-59 231.5 251 54.2
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 2.6e-58 229.9 280 47.1
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 3.3e-58 229.6 261 49.4
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.2e-57 226.9 262 50.0
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 2.2e-57 226.9 261 49.0
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.1e-56 224.6 277 46.2
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 6.9e-56 221.9 277 49.8
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 1.3e-54 217.6 266 48.5
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.7e-54 217.2 255 50.6
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 2.2e-54 216.9 257 49.8
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 5.0e-54 215.7 259 49.8
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 1.9e-53 213.8 205 59.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 4.2e-53 212.6 263 45.6
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 5.5e-53 212.2 267 46.8
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 7.2e-53 211.8 262 50.0
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 2.7e-52 209.9 283 44.2
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 2.7e-52 209.9 224 54.0
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 3.6e-52 209.5 220 50.9
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 7.9e-52 208.4 261 47.5
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 2.3e-51 206.8 272 46.7
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 2.0e-50 203.8 254 48.4
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 2.6e-50 203.4 254 48.4
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 4.4e-50 202.6 211 57.3
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 4.4e-50 202.6 244 47.1
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 2.8e-49 199.9 231 53.7
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 1.1e-48 198.0 243 46.9
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.8e-48 197.2 217 50.2
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 5.0e-46 189.1 201 54.7
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.5e-46 188.3 192 54.7
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 8.5e-46 188.3 297 39.1
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-44 183.3 204 51.5
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 5.2e-43 179.1 202 51.5
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.8e-43 178.3 204 50.5
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 2.8e-41 173.3 208 49.5
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 2.7e-39 166.8 267 36.7
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 5.9e-39 165.6 283 35.7
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 7.7e-39 165.2 154 59.1
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 1.9e-37 160.6 252 42.9
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 4.2e-37 159.5 232 42.2
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 4.0e-35 152.9 333 35.7
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 6.8e-35 152.1 289 38.1
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 5.9e-31 139.0 261 38.3
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 3.8e-30 136.3 106 67.9
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.4e-27 127.9 256 38.3
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.4e-27 127.9 217 38.7
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 2.3e-27 127.1 92 70.7
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 2.7e-23 113.6 279 30.8
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 1.4e-19 101.3 136 40.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 2.7e-15 87.0 128 40.6
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 1.7e-14 84.3 123 43.9
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 1.8e-11 74.3 77 48.1
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 2.7e-07 60.5 85 42.4
CSS0039372 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 3.5e-07 60.1 42 71.4


User provided reference genes

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