Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 6.9e-128 460.7 238 100.0
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 2.9e-110 402.1 239 88.3
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 3.8e-86 322.0 240 74.6
Carub.0007s0993 Capsella rubella HOM05D003759 ORTHO05D004149 2.7e-84 315.8 239 74.1
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.6e-79 300.1 229 70.7
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 2.4e-72 276.2 203 73.4
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 1.6e-55 220.3 214 62.6
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 2.3e-54 216.5 215 62.8
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.4e-48 197.2 250 50.8
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 1.2e-47 194.1 231 55.4
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 3.5e-47 192.6 231 55.0
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 1.7e-46 190.3 231 54.5
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 8.6e-46 188.0 215 56.3
BolC1t00818H Brassica oleracea HOM05D003759 ORTHO05D004149 8.6e-46 188.0 215 57.2
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 7.3e-45 184.9 230 54.8
A03p60150 Brassica napus HOM05D003759 ORTHO05D004149 3.6e-44 182.6 230 54.8
BraA03t15060Z Brassica rapa HOM05D003759 ORTHO05D004149 3.6e-44 182.6 230 54.8
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 6.2e-44 181.8 250 47.2
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 1.8e-43 180.3 230 53.9
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 1.8e-43 180.3 230 53.9
Aa31LG2G19870 Aethionema arabicum HOM05D003759 ORTHO05D004149 2.4e-32 143.3 238 41.6
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 2.8e-20 103.2 243 34.6
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 1.1e-19 101.3 230 35.2
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.2e-17 93.6 225 34.2
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.4e-16 90.1 225 33.8
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 3.2e-16 89.7 225 33.8
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 3.2e-16 89.7 254 31.5
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 7.1e-16 88.6 228 33.8
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 3.5e-15 86.3 280 31.1
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 1.3e-14 84.3 226 33.6
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 1.3e-14 84.3 222 31.5
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 1.8e-14 84.0 235 34.0
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.3e-14 83.6 268 30.2
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 3.9e-14 82.8 238 31.1
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 3.9e-14 82.8 227 33.0
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 3.9e-14 82.8 265 30.9
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 5.1e-14 82.4 267 30.3
A03p12490 Brassica napus HOM05D003759 ORTHO05D004149 8.7e-14 81.6 217 35.9
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 8.7e-14 81.6 241 29.0
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.1e-13 81.3 261 33.0
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 2.5e-13 80.1 226 31.4
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 4.3e-13 79.3 225 34.7
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.6e-12 77.4 269 30.1
AT5G57910 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 3.7e-12 76.3 228 30.3
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 3.7e-12 76.3 280 29.6
BolC3t13911H Brassica oleracea HOM05D003759 ORTHO05D004149 4.8e-12 75.9 217 35.0
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 4.8e-12 75.9 226 32.7
C03p14700 Brassica napus HOM05D003759 ORTHO05D004149 6.2e-12 75.5 217 35.0
BolC9t57829H Brassica oleracea HOM05D003759 ORTHO05D004149 6.2e-12 75.5 230 29.1
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 6.2e-12 75.5 245 28.6
DCAR_014806 Daucus carota HOM05D003759 ORTHO05D004149 6.2e-12 75.5 275 29.1
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.2e-12 75.5 213 31.9
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 6.2e-12 75.5 226 33.6
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 8.1e-12 75.1 223 31.4
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 8.1e-12 75.1 217 29.5
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 1.1e-11 74.7 223 30.0
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 1.8e-11 73.9 227 29.5
BcaB05g22385 Brassica carinata HOM05D003759 ORTHO05D004149 2.4e-11 73.6 217 33.6
C09p49780 Brassica napus HOM05D003759 ORTHO05D004149 2.4e-11 73.6 232 30.6
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 2.4e-11 73.6 208 30.8
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 2.4e-11 73.6 264 29.9
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 2.4e-11 73.6 225 34.7
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 3.1e-11 73.2 230 31.7
BcaB05g22386 Brassica carinata HOM05D003759 ORTHO05D004149 3.1e-11 73.2 229 31.9
C02p13760 Brassica napus HOM05D003759 ORTHO05D004149 3.1e-11 73.2 229 31.9
BolC2t07494H Brassica oleracea HOM05D003759 ORTHO05D004149 3.1e-11 73.2 229 31.9
Carub.0008s1844 Capsella rubella HOM05D003759 ORTHO05D004149 3.1e-11 73.2 248 31.9
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 3.1e-11 73.2 293 28.3
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 4.0e-11 72.8 234 29.9
A10p15270 Brassica napus HOM05D003759 ORTHO05D004149 5.3e-11 72.4 228 30.3
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 5.3e-11 72.4 240 31.2
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 1.2e-10 71.2 265 29.4
A02p08110 Brassica napus HOM05D003759 ORTHO05D004149 1.2e-10 71.2 229 32.3
BraA02t05884Z Brassica rapa HOM05D003759 ORTHO05D004149 1.2e-10 71.2 229 32.3
BraA10t43608Z Brassica rapa HOM05D003759 ORTHO05D004149 1.2e-10 71.2 228 29.8
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 1.2e-10 71.2 226 30.5
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 1.5e-10 70.9 212 32.1
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 2.0e-10 70.5 198 33.8
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 2.6e-10 70.1 243 31.3
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 4.5e-10 69.3 224 33.9
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 4.5e-10 69.3 236 28.4
CARHR271690 Cardamine hirsuta HOM05D003759 ORTHO05D004149 5.8e-10 68.9 231 31.6
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 5.8e-10 68.9 238 32.8
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 5.8e-10 68.9 319 26.0
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 7.6e-10 68.6 226 30.5
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 7.6e-10 68.6 268 26.9
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 7.6e-10 68.6 244 28.7
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.0e-09 68.2 222 29.7
AL8G33980 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 1.3e-09 67.8 209 30.6
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.3e-09 67.8 295 29.2
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.7e-09 67.4 213 31.0
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 1.7e-09 67.4 269 26.8
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 1.7e-09 67.4 76 43.4
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 2.2e-09 67.0 294 29.3
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 2.9e-09 66.6 231 32.9
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 2.9e-09 66.6 255 27.5
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.9e-09 66.6 223 28.3
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 3.8e-09 66.2 225 32.4
THA.LOC104813538 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.8e-09 66.2 219 31.1
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 4.9e-09 65.9 226 27.9
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 6.4e-09 65.5 222 29.3
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 6.4e-09 65.5 222 33.3
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 6.4e-09 65.5 221 27.1
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 8.4e-09 65.1 242 27.3
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 8.4e-09 65.1 220 28.6
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 1.1e-08 64.7 251 27.9
BcaB01g04466 Brassica carinata HOM05D003759 ORTHO05D004149 1.1e-08 64.7 210 31.9
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 1.4e-08 64.3 255 27.8
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 4.2e-08 62.8 227 27.8
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 4.2e-08 62.8 266 25.6
BraA03t10564Z Brassica rapa HOM05D003759 ORTHO05D004149 5.5e-08 62.4 217 32.7
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 5.5e-08 62.4 236 28.4
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 5.5e-08 62.4 219 30.1
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 9.3e-08 61.6 238 26.5
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.2e-07 61.2 267 25.1
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 1.6e-07 60.8 247 25.9
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 1.6e-07 60.8 206 29.6
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 2.7e-07 60.1 230 27.8
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.7e-07 60.1 229 27.1
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 2.7e-07 60.1 229 27.1
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 3.5e-07 59.7 101 44.6
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 4.6e-07 59.3 224 26.3
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 4.6e-07 59.3 223 27.8
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 6.0e-07 58.9 217 27.6
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 6.0e-07 58.9 217 27.6
HanXRQChr09g0244571 Helianthus annuus HOM05D003759 ORTHO05D004149 7.9e-07 58.5 152 31.6
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 7.9e-07 58.5 256 27.3
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 1.0e-06 58.2 77 42.9
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 1.3e-06 57.8 128 32.0
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 1.8e-06 57.4 224 25.9
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.8e-06 57.4 220 29.1
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 3.9e-06 56.2 241 27.0
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 5.1e-06 55.8 213 26.3
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 5.1e-06 55.8 265 26.8
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 6.7e-06 55.5 266 26.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 8.7e-06 55.1 221 29.4


User provided reference genes

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