Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 9.0e-93 343.6 174 100.0
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 7.4e-87 323.9 174 94.3
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 8.2e-78 293.9 174 82.8
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 8.2e-78 293.9 174 82.8
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 8.2e-78 293.9 174 82.8
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 8.2e-78 293.9 174 82.8
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 1.8e-77 292.7 174 82.8
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 2.4e-77 292.4 174 82.2
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 5.3e-77 291.2 174 81.6
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 9.0e-77 290.4 174 82.2
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 7.6e-76 287.3 174 81.0
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 1.4e-74 283.1 174 79.3
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 4.2e-74 281.6 174 80.5
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 4.2e-74 281.6 174 79.3
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 5.5e-74 281.2 173 79.2
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 6.7e-72 274.2 167 79.6
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 1.1e-71 273.5 174 77.6
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 2.5e-71 272.3 174 77.0
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 2.5e-71 272.3 167 79.0
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 2.8e-70 268.9 174 74.7
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 3.7e-70 268.5 174 74.1
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 9.0e-69 263.8 174 75.3
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 5.9e-68 261.2 174 73.0
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 1.0e-67 260.4 174 71.8
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.3e-67 260.0 167 75.4
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 1.3e-67 260.0 174 73.6
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 1.3e-67 260.0 174 73.0
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 3.8e-67 258.5 174 72.4
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 5.0e-67 258.1 174 74.1
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 5.0e-67 258.1 174 74.1
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 5.0e-67 258.1 174 73.0
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 5.0e-67 258.1 174 73.0
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 6.5e-67 257.7 174 74.1
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 73.0
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 3.2e-66 255.4 174 73.0
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 3.2e-66 255.4 174 71.8
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 4.2e-66 255.0 174 71.3
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 71.3
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 71.8
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 73.6
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 1.2e-65 253.4 174 72.4
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 1.6e-65 253.1 174 71.3
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 2.7e-65 252.3 174 72.4
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 2.7e-65 252.3 174 71.8
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 2.7e-65 252.3 174 71.8
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 3.6e-65 251.9 174 71.8
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 3.6e-65 251.9 174 70.1
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 6.1e-65 251.1 174 70.7
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 2.3e-64 249.2 174 70.7
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 3.0e-64 248.8 151 78.1
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 3.0e-64 248.8 175 70.3
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 70.1
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 5.1e-64 248.1 174 69.5
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 70.1
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 70.1
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 69.5
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 1.5e-63 246.5 174 70.7
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 1.9e-63 246.1 174 68.4
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 2.5e-63 245.7 194 64.4
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 71.3
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 5.7e-63 244.6 174 68.4
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.7e-62 243.0 174 69.0
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 68.4
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 2.2e-62 242.7 175 69.7
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 69.0
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 66.7
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 69.5
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 68.4
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 67.8
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 69.0
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 1.4e-61 240.0 174 69.5
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 66.1
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 1.8e-61 239.6 174 68.4
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 67.2
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 66.1
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.0e-60 236.1 174 67.2
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 2.0e-60 236.1 174 68.4
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 2.6e-60 235.7 174 67.2
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 4.5e-60 235.0 174 67.2
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 4.5e-60 235.0 174 67.8
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 1.0e-59 233.8 198 62.6
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 1.9e-58 229.6 174 63.2
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 6.1e-57 224.6 171 64.9
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 1.4e-56 223.4 171 64.3
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 1.4e-56 223.4 175 65.1
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.3e-55 218.8 156 67.9
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 3.3e-55 218.8 174 64.4
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 62.1
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 9.7e-55 217.2 158 68.4
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 2.8e-54 215.7 174 63.2
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 4.8e-54 214.9 174 63.2
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 8.2e-54 214.2 174 63.2
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 8.2e-54 214.2 174 63.2
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 1.8e-53 213.0 174 60.9
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 2.6e-52 209.1 143 67.8
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 5.9e-52 208.0 174 60.9
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 7.7e-52 207.6 174 60.9
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 2.2e-51 206.1 146 68.5
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 3.8e-51 205.3 173 59.0
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 3.8e-51 205.3 174 60.9
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 2.5e-50 202.6 174 60.3
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 4.2e-50 201.8 151 68.2
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 4.7e-49 198.4 174 58.0
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 3.0e-48 195.7 174 57.5
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 1.1e-47 193.7 174 55.7
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 3.3e-47 192.2 174 57.5
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 1.7e-46 189.9 174 54.6
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.4e-45 186.8 122 72.1
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 1.4e-45 186.8 176 59.1
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.8e-45 186.4 172 54.7
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 5.3e-45 184.9 174 54.6
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 5.3e-45 184.9 122 69.7
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 3.5e-44 182.2 172 54.1
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 5.9e-44 181.4 196 50.0
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 1.3e-43 180.3 122 66.4
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 9.4e-42 174.1 174 52.3
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 2.1e-41 172.9 175 49.7
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 3.0e-40 169.1 182 52.2
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 2.6e-39 166.0 171 51.5
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 3.3e-39 165.6 239 41.0
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 7.0e-37 157.9 173 47.4
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 1.7e-35 153.3 173 50.9
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 1.5e-34 150.2 173 44.5
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 4.7e-33 145.2 127 63.8
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 6.1e-33 144.8 94 72.3
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 8.0e-33 144.4 95 68.4
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 1.0e-32 144.1 119 62.2
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 3.4e-31 139.0 93 67.7
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.8e-30 136.0 94 64.9
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.8e-29 133.3 96 62.5
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 1.5e-26 123.6 123 56.1
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 7.0e-21 104.8 168 36.3
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 3.8e-19 99.0 85 58.8
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.5e-18 96.3 67 64.2
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.4e-16 90.5 55 70.9
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 1.2e-15 87.4 176 31.8
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.9e-14 82.8 53 69.8
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 7.0e-13 78.2 48 70.8
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 2.5e-10 69.7 94 45.7
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 2.1e-09 66.6 173 28.3
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.8e-09 66.2 38 73.7
Sp4g02835 Schrenkiella parvula HOM05D005031 ORTHO05D006098 8.9e-08 61.2 172 29.1
CARHR184590 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.2e-06 56.6 48 54.2


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