Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.7e-75 285.8 130 100.0
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 6.3e-59 230.7 130 83.1
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.4e-53 213.0 129 71.3
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-51 205.7 130 69.2
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-51 205.7 130 69.2
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.9e-51 204.5 130 70.8
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 3.1e-50 201.8 133 73.7
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 1.6e-49 199.5 130 66.2
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 1.7e-48 196.1 137 66.4
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 1.7e-48 196.1 133 68.4
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 5.0e-48 194.5 137 65.0
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 8.3e-43 177.2 131 60.3
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 1.1e-42 176.8 131 60.3
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 9.2e-42 173.7 130 58.5
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 6.6e-40 167.5 130 55.4
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 5.6e-39 164.5 130 58.5
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 7.3e-39 164.1 130 56.9
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-38 163.3 130 56.2
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-38 163.3 130 56.9
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.6e-38 161.8 120 60.0
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 5.2e-37 157.9 130 55.4
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 1.5e-36 156.4 134 53.7
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.7e-35 152.9 152 50.7
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.7e-35 152.9 132 53.8
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-34 150.2 111 61.3
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 9.2e-34 147.1 112 58.0
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 9.2e-34 147.1 112 58.0
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.7e-33 145.6 130 52.3
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 4.6e-33 144.8 130 52.3
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 3.0e-32 142.1 113 51.3
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 3.0e-32 142.1 113 51.3
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 3.0e-32 142.1 113 51.3
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.9e-32 141.7 130 50.0
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 5.1e-32 141.4 125 53.6
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.1e-31 140.2 132 53.0
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.5e-31 139.8 116 53.4
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.9e-31 139.4 102 57.8
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 3.3e-31 138.7 131 52.7
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 7.3e-31 137.5 133 48.1
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 2.8e-30 135.6 131 47.3
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 2.8e-30 135.6 131 48.9
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 2.8e-30 135.6 131 48.9
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 6.2e-30 134.4 131 48.9
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 6.2e-30 134.4 131 48.9
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.1e-29 133.7 111 55.0
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.3e-29 132.5 128 52.3
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.3e-29 132.5 117 51.3
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 4.0e-29 131.7 130 46.2
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 4.0e-29 131.7 109 51.4
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 5.2e-29 131.3 121 48.8
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 5.2e-29 131.3 131 48.1
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 8.9e-29 130.6 132 47.7
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 8.9e-29 130.6 131 48.1
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 8.9e-29 130.6 131 48.1
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-28 130.2 131 48.1
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 1.2e-28 130.2 131 48.1
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 1.5e-28 129.8 132 47.0
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 1.5e-28 129.8 132 47.0
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 9.9e-28 127.1 123 47.2
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 1.3e-27 126.7 130 50.0
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.9e-27 125.6 112 50.0
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.4e-27 124.4 132 45.5
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 1.4e-26 123.2 126 43.7
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 3.2e-26 122.1 109 48.6
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.1e-26 121.7 105 48.6
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 3.5e-25 118.6 126 49.2
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 7.8e-25 117.5 105 46.7
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 2.3e-24 115.9 106 46.2
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 3.9e-24 115.2 131 43.5
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 3.9e-24 115.2 127 44.1
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 8.6e-24 114.0 128 45.3
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 8.6e-24 114.0 105 46.7
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 8.6e-24 114.0 105 46.7
CsaV3_2G008640 Cucumis sativus L. HOM05D006945 ORTHO05D005549 1.9e-23 112.8 127 43.3
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-23 112.5 102 48.0
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 2.5e-23 112.5 130 41.5
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 2.5e-23 112.5 130 41.5
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 7.3e-23 110.9 130 46.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-22 110.2 130 40.0
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 1.6e-22 109.8 130 45.4
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 1.6e-22 109.8 127 42.5
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.8e-22 109.0 104 46.2
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 8.1e-22 107.5 130 41.5
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.4e-21 106.7 100 53.0
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.8e-21 106.3 130 44.6
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.0e-21 105.1 130 43.8
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 8.9e-21 104.0 106 44.3
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.6e-20 102.4 105 43.8
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 3.4e-20 102.1 131 36.6
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 2.2e-19 99.4 132 38.6
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 1.9e-18 96.3 126 39.7
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 3.5e-17 92.0 131 35.9
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.9e-16 88.6 123 40.7
Ah.05g178690 Amaranthus hybridus HOM05D006945 ORTHO05D005549 2.5e-15 85.9 93 45.2
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 2.5e-15 85.9 131 35.1
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 4.3e-15 85.1 131 35.1
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 5.6e-15 84.7 71 47.9
Prupe.1G080000 Prunus persica HOM05D009688 ORTHO05D005549 5.6e-15 84.7 138 34.1
Cpa.g.sc95.33 Carica papaya HOM05D009688 ORTHO05D005549 9.6e-15 84.0 111 38.7
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.1e-14 82.8 123 35.8
Duzib168G0317 Durio zibethinus HOM05D009688 ORTHO05D005549 3.6e-14 82.0 114 36.8
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.0e-13 78.6 132 34.1
TPR.G38489 Trifolium pratense HOM05D014986 ORTHO05D014232 4.0e-13 78.6 115 41.7
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 9.0e-13 77.4 50 56.0
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 9.0e-13 77.4 132 35.6
EL10Ac6g13469 Beta vulgaris HOM05D006945 ORTHO05D005549 1.5e-12 76.6 108 41.7
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.0e-12 76.3 121 33.1
Gohir.A08G018300 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.8e-12 74.7 130 34.6
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 7.6e-12 74.3 50 54.0
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 1.7e-11 73.2 110 34.5
TPR.G30230 Trifolium pratense HOM05D018581 ORTHO05D005549 2.2e-11 72.8 129 36.4
Thecc.09G180000 Theobroma cacao HOM05D009688 ORTHO05D005549 3.8e-11 72.0 132 37.9
BcaNung02067 Brassica carinata HOM05D006945 ORTHO05D005549 4.2e-10 68.6 37 75.7
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.2e-10 68.6 132 34.1
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 9.3e-10 67.4 135 37.8
Gorai.004G026000 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.7e-09 65.9 132 33.3
Eucgr.L01934 Eucalyptus grandis HOM05D006945 ORTHO05D005549 6.0e-09 64.7 70 40.0
Gohir.D08G028900 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.3e-08 63.5 132 32.6
Glyma.15G164300 Glycine max HOM05D014986 ORTHO05D014232 1.7e-08 63.2 127 31.5
TPR.G30277 Trifolium pratense HOM05D009822 ORTHO05D011160 5.1e-08 61.6 93 36.6
Thhalv10010998m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.3e-07 58.5 54 50.0
Eucgr.C02234 Eucalyptus grandis HOM05D006945 ORTHO05D005549 1.6e-06 56.6 63 38.1
Eucgr.C02235 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.1e-06 56.2 63 38.1
Eucgr.C02268 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.1e-06 56.2 63 38.1


User provided reference genes

Program Settings