Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G30064 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 4.0e-40 167.5 79 100.0
AL7G22160 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 8.1e-33 143.3 77 88.3
AT2G29045 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 1.1e-29 132.9 79 78.5
Carub.0004s1003 Capsella rubella HOM05D008274 ORTHO05D010930 1.0e-27 126.3 79 75.9
Thhalv10027260m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 2.3e-27 125.2 79 70.9
Carub.0007s1057 Capsella rubella HOM05D008274 ORTHO05D010930 3.3e-26 121.3 81 71.6
Thhalv10027526m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.2e-25 119.4 77 70.1
Thhalv10026709m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 8.4e-22 106.7 81 66.7
Carub.0007s1056 Capsella rubella HOM05D008274 ORTHO05D010930 1.9e-21 105.5 79 59.5
Sp7g27860 Schrenkiella parvula HOM05D008274 ORTHO05D024519 1.9e-21 105.5 79 65.8
BraA01t00752Z Brassica rapa HOM05D008274 ORTHO05D010930 3.2e-21 104.8 75 64.0
A01p08070 Brassica napus HOM05D008274 ORTHO05D010930 4.2e-21 104.4 75 62.7
A09p12750 Brassica napus HOM05D008274 ORTHO05D010930 5.4e-21 104.0 80 62.5
Sp3g33440 Schrenkiella parvula HOM05D008274 ORTHO05D010930 1.2e-20 102.8 80 62.5
AT4G30067 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 1.6e-20 102.4 79 58.2
BcaC09g52235 Brassica carinata HOM05D008274 ORTHO05D010930 2.7e-20 101.7 75 62.7
CARHR164790 Cardamine hirsuta HOM05D008274 ORTHO05D010930 3.5e-20 101.3 79 67.1
BraA09t36919Z Brassica rapa HOM05D008274 ORTHO05D010930 4.6e-20 100.9 80 60.0
CARHR101090 Cardamine hirsuta HOM05D008274 ORTHO05D010930 4.6e-20 100.9 79 64.6
Thhalv10027161m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 7.8e-20 100.1 79 62.0
AL3G47880 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 3.0e-19 98.2 79 60.8
Carub.0003s3453 Capsella rubella HOM05D008274 ORTHO05D010930 1.9e-18 95.5 79 63.3
Thhalv10002176m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.9e-18 95.5 80 61.2
CARHR101100 Cardamine hirsuta HOM05D008274 ORTHO05D010930 2.4e-16 88.6 80 58.8
Thhalv10028327m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 2.4e-16 88.6 79 60.8
AT2G20208 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 6.9e-16 87.0 80 55.0
Sp7g27910 Schrenkiella parvula HOM05D008274 ORTHO05D033960 6.9e-16 87.0 76 55.3
Carub.0007s1054 Capsella rubella HOM05D008274 ORTHO05D033960 2.6e-15 85.1 81 54.3
A02p12430 Brassica napus HOM05D008274 ORTHO05D010930 4.5e-15 84.3 79 54.4
BraA02t06307Z Brassica rapa HOM05D008274 ORTHO05D010930 4.5e-15 84.3 79 54.4
BcaB05g24016 Brassica carinata HOM05D008274 ORTHO05D010930 9.9e-15 83.2 79 53.2
BolC2t08191H Brassica oleracea HOM05D008274 ORTHO05D010930 1.3e-14 82.8 79 53.2
CARHR101110 Cardamine hirsuta HOM05D008274 ORTHO05D010930 1.3e-14 82.8 80 56.2
C02p20550 Brassica napus HOM05D008274 ORTHO05D010930 2.9e-14 81.6 79 51.9
BolC1t00895H Brassica oleracea HOM05D008274 ORTHO05D010930 2.9e-14 81.6 78 53.8
C02p05610 Brassica napus HOM05D008274 ORTHO05D024519 1.4e-13 79.3 79 49.4
BolC2t06505H Brassica oleracea HOM05D008274 ORTHO05D024519 1.4e-13 79.3 79 49.4
Aa31LG2G20510 Aethionema arabicum HOM05D008274 ORTHO05D010930 1.9e-13 79.0 58 60.3
Thhalv10026917m.g Eutrema salsugineum HOM05D008274 ORTHO05D033960 2.4e-13 78.6 78 50.0
AL7G22150 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 3.2e-13 78.2 55 54.5
A02p01370 Brassica napus HOM05D008274 ORTHO05D024519 9.3e-13 76.6 79 48.1
BraA02t05116Z Brassica rapa HOM05D008274 ORTHO05D024519 9.3e-13 76.6 79 48.1
Thhalv10002324m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 9.3e-13 76.6 83 48.2
A06p37540 Brassica napus HOM05D008274 ORTHO05D020184 7.9e-12 73.6 72 50.0
BraA06t26676Z Brassica rapa HOM05D008274 ORTHO05D020184 7.9e-12 73.6 72 50.0
C07p40820 Brassica napus HOM05D008274 ORTHO05D020184 1.0e-11 73.2 72 50.0
BcaNung04094 Brassica carinata HOM05D008274 ORTHO05D010930 3.0e-11 71.6 63 50.8
A02p26220 Brassica napus HOM05D008274 ORTHO05D020184 3.9e-11 71.2 71 49.3
BraA02t07623Z Brassica rapa HOM05D008274 ORTHO05D020184 3.9e-11 71.2 71 49.3
C03p56540 Brassica napus HOM05D011508 ORTHO05D017548 5.1e-11 70.9 76 48.7
BolC3t17940H Brassica oleracea HOM05D011508 ORTHO05D017548 5.1e-11 70.9 76 48.7
A08p30050 Brassica napus HOM05D008274 ORTHO05D028205 1.1e-10 69.7 81 50.6
BraA08t34940Z Brassica rapa HOM05D008274 ORTHO05D028205 1.1e-10 69.7 81 50.6
C08p19140 Brassica napus HOM05D008274 ORTHO05D028205 1.5e-10 69.3 82 50.0
A04p10580 Brassica napus HOM05D008274 ORTHO05D010930 1.9e-10 68.9 82 46.3
C08p19110 Brassica napus HOM05D008274 ORTHO05D028205 3.3e-10 68.2 82 48.8
BraA03t13686Z Brassica rapa HOM05D011508 ORTHO05D017548 4.3e-10 67.8 76 47.4
Aa31LG2G20500 Aethionema arabicum HOM05D008274 ORTHO05D010930 5.6e-10 67.4 57 49.1
AT1G73603 Arabidopsis thaliana HOM05D029201 ORTHO05D026819 7.4e-10 67.0 77 46.8
BcaC04g22812 Brassica carinata HOM05D008274 ORTHO05D010930 7.4e-10 67.0 66 47.0
BolC9t54416H Brassica oleracea HOM05D008274 ORTHO05D010930 7.4e-10 67.0 66 47.0
C04p44220 Brassica napus HOM05D008274 ORTHO05D010930 2.8e-09 65.1 74 47.3
C09p15110 Brassica napus HOM05D008274 ORTHO05D010930 2.8e-09 65.1 60 50.0
C03p56480 Brassica napus HOM05D011508 ORTHO05D020194 3.7e-09 64.7 71 47.9
A03p45540 Brassica napus HOM05D011508 ORTHO05D017548 4.8e-09 64.3 76 43.4
C03p56450 Brassica napus HOM05D011508 ORTHO05D020194 4.8e-09 64.3 71 47.9
A03p45500 Brassica napus HOM05D011508 ORTHO05D020194 1.4e-08 62.8 71 46.5
BolC7t44604H Brassica oleracea HOM05D008274 ORTHO05D020184 1.4e-08 62.8 62 54.8
Thhalv10028341m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.4e-08 62.8 87 47.1
C07p40790 Brassica napus HOM05D008274 ORTHO05D020184 2.4e-08 62.0 72 45.8
A03p45530 Brassica napus HOM05D011508 ORTHO05D020194 4.0e-08 61.2 71 49.3
BraA03t13685Z Brassica rapa HOM05D011508 ORTHO05D020194 4.0e-08 61.2 71 49.3
C03p56520 Brassica napus HOM05D011508 ORTHO05D020194 6.9e-08 60.5 71 47.9
BolC3t17938H Brassica oleracea HOM05D011508 ORTHO05D020194 6.9e-08 60.5 71 47.9
AT1G49715 Arabidopsis thaliana HOM05D029201 ORTHO05D026819 2.0e-07 58.9 77 45.5
AT1G73607 Arabidopsis thaliana HOM05D029201 ORTHO05D026819 2.0e-07 58.9 77 45.5
Carub.0002s1313 Capsella rubella HOM05D011508 ORTHO05D017548 2.9e-06 55.1 74 44.6


User provided reference genes

Program Settings