Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.1e-88 327.8 173 100.0
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 5.8e-84 314.3 174 96.6
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 8.4e-83 310.5 177 93.8
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.2e-82 308.1 177 93.2
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 9.3e-82 307.0 178 92.1
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 1.2e-81 306.6 177 91.0
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 2.7e-81 305.4 175 91.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 4.6e-81 304.7 174 92.0
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 4.6e-81 304.7 174 92.0
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 3.0e-80 302.0 174 90.2
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 3.0e-80 302.0 174 90.2
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 2.5e-79 298.9 177 87.0
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 3.1e-77 292.0 175 85.7
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.0e-77 291.6 177 85.3
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 5.3e-77 291.2 175 85.7
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 3.4e-76 288.5 175 85.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 3.4e-76 288.5 175 85.1
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 3.8e-75 285.0 174 83.3
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 3.8e-75 285.0 174 82.8
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 2.4e-74 282.3 176 83.0
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 4.2e-74 281.6 177 81.4
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 3.5e-73 278.5 174 81.6
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.0e-72 276.9 177 80.2
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.0e-72 276.9 174 81.0
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 1.7e-72 276.2 177 80.2
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 5.1e-72 274.6 178 77.0
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 6.6e-72 274.2 176 81.8
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 1.9e-71 272.7 163 84.0
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.5e-71 272.3 176 77.8
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 4.3e-71 271.6 176 77.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 5.6e-71 271.2 160 87.5
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 9.6e-71 270.4 177 77.4
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 1.3e-70 270.0 162 85.2
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-70 270.0 176 78.4
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.8e-70 268.9 176 76.1
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.8e-70 268.9 176 76.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 2.8e-70 268.9 177 78.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 3.6e-70 268.5 178 76.4
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 6.2e-70 267.7 174 78.7
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 1.1e-69 266.9 167 82.0
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.4e-69 266.5 176 75.6
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.4e-69 266.5 176 75.6
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 1.8e-69 266.2 175 76.6
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.4e-69 265.8 176 76.1
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 3.1e-69 265.4 172 76.2
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 4.0e-69 265.0 167 80.8
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 6.9e-69 264.2 178 75.3
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 9.0e-69 263.8 155 85.2
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 76.1
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 173 76.9
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 173 76.9
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.6e-68 262.3 173 76.9
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 3.4e-68 261.9 173 75.7
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 3.4e-68 261.9 163 79.1
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 3.4e-68 261.9 175 74.9
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 4.5e-68 261.5 179 74.9
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 4.5e-68 261.5 155 85.2
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 5.8e-68 261.2 173 75.1
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 5.8e-68 261.2 174 77.0
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 5.8e-68 261.2 176 77.8
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 5.8e-68 261.2 180 73.9
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 5.8e-68 261.2 180 73.9
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 5.8e-68 261.2 180 73.9
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.9e-68 260.4 164 79.9
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 1.3e-67 260.0 173 75.1
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.3e-67 260.0 174 74.7
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 2.2e-67 259.2 171 75.4
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 2.2e-67 259.2 163 79.8
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 2.2e-67 259.2 173 76.9
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.8e-67 258.5 176 76.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 4.9e-67 258.1 171 76.6
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 6.4e-67 257.7 180 75.0
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 8.4e-67 257.3 177 78.5
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 8.4e-67 257.3 179 73.2
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 8.4e-67 257.3 163 79.8
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.4e-66 256.5 173 78.0
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 2.4e-66 255.8 175 76.0
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 2.4e-66 255.8 179 73.7
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 3.2e-66 255.4 178 74.2
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 4.2e-66 255.0 179 74.3
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 4.2e-66 255.0 179 74.3
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.4e-66 254.6 160 79.4
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 7.1e-66 254.2 153 82.4
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 7.1e-66 254.2 151 84.1
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 76.4
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.6e-65 253.1 179 73.2
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.1e-65 252.7 153 81.7
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.0e-64 250.4 178 71.9
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 1.0e-64 250.4 151 83.4
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.3e-64 250.0 179 72.1
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 3.0e-64 248.8 153 82.4
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.1e-63 246.9 153 81.0
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.1e-63 246.9 173 72.3
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 5.6e-63 244.6 172 73.3
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 7.4e-63 244.2 154 79.2
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.6e-62 243.0 147 83.7
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.8e-62 242.3 150 80.0
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.8e-61 239.6 176 69.9
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.4e-61 239.2 160 74.4
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 6.9e-61 237.7 170 70.6
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.5e-60 236.5 176 69.9
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 3.4e-60 235.3 170 68.8
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 4.9e-59 231.5 170 69.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 4.2e-58 228.4 155 73.5
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.5e-58 228.0 153 73.2
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 9.3e-58 227.3 167 69.5
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 8.7e-56 220.7 137 78.1
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 1.9e-55 219.5 145 77.2
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.1e-53 211.8 152 71.1
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.5e-52 209.9 159 68.6
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.6e-52 209.1 131 80.2
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 1.2e-49 200.3 153 63.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 1.6e-49 199.9 118 84.7
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 1.6e-49 199.9 120 84.2
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 7.9e-49 197.6 154 64.9
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.9e-48 195.3 129 76.0
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 9.7e-47 190.7 129 81.4
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.6e-46 189.9 121 82.6
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 1.1e-45 187.2 152 61.8
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 3.1e-45 185.7 108 87.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 2.6e-44 182.6 131 67.9
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 5.0e-43 178.3 107 81.3
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 1.4e-42 176.8 107 80.4
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 2.3e-32 142.9 91 78.0
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 2.4e-29 132.9 123 49.6
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 4.7e-17 92.0 106 54.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 9.4e-10 67.8 118 42.4


User provided reference genes

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