Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 6.6e-146 520.8 281 100.0
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.4e-127 459.9 281 88.3
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.5e-115 418.7 274 83.9
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.8e-93 345.5 281 61.6
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.0e-90 337.4 279 66.3
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 8.8e-90 334.3 282 59.9
Carub.0008s0192 Capsella rubella HOM05D008365 ORTHO05D011149 5.7e-89 331.6 276 67.4
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 6.3e-88 328.2 281 58.0
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 1.8e-87 326.6 282 58.5
AT4G29770 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 1.6e-83 313.5 279 56.3
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 5.5e-76 288.5 263 64.3
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 1.0e-74 284.3 267 56.2
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 6.8e-74 281.6 269 54.3
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 8.8e-74 281.2 267 54.7
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 7.5e-73 278.1 271 53.9
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 3.7e-72 275.8 271 53.9
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 3.8e-69 265.8 282 54.3
A08p19120 Brassica napus HOM05D008365 ORTHO05D011149 1.5e-68 263.8 270 54.8
Thhalv10027444m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 1.2e-67 260.8 275 58.2
C03p88570 Brassica napus HOM05D008365 ORTHO05D011149 3.4e-65 252.7 248 54.0
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 1.0e-61 241.1 266 54.5
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 2.3e-61 240.0 264 49.2
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 1.5e-60 237.3 296 45.9
BcaB03g12655 Brassica carinata HOM05D008365 ORTHO05D011149 8.0e-59 231.5 267 45.7
A08p19130 Brassica napus HOM05D008365 ORTHO05D011149 4.4e-57 225.7 266 53.0
A07p02810 Brassica napus HOM05D008365 ORTHO05D011149 5.7e-57 225.3 273 45.1
C03p88590 Brassica napus HOM05D008365 ORTHO05D011149 5.7e-57 225.3 266 52.6
BraA07t28079Z Brassica rapa HOM05D008365 ORTHO05D011149 5.7e-57 225.3 273 45.1
A01p07560 Brassica napus HOM05D008365 ORTHO05D011149 1.6e-54 217.2 264 46.6
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 1.6e-54 217.2 248 48.8
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 7.8e-54 214.9 274 45.6
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 5.0e-53 212.2 267 45.3
CARHR251110 Cardamine hirsuta HOM05D008365 ORTHO05D011149 3.3e-52 209.5 260 46.5
C01p08200 Brassica napus HOM05D008365 ORTHO05D011149 4.7e-51 205.7 248 48.0
BraA01t00699Z Brassica rapa HOM05D008365 ORTHO05D011149 9.8e-49 198.0 248 46.8
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 1.7e-45 187.2 257 42.0
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.6e-45 185.3 257 42.8
Carub.0001s4054 Capsella rubella HOM05D008365 ORTHO05D014862 1.5e-41 174.1 257 42.8
Carub.0001s4052 Capsella rubella HOM05D008365 ORTHO05D014862 1.3e-40 171.0 260 39.6
Carub.0001s4053 Capsella rubella HOM05D008365 ORTHO05D014862 8.3e-40 168.3 254 41.3
AL1G59580 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 3.2e-39 166.4 258 40.3
AT5G18040 Arabidopsis thaliana HOM05D008365 ORTHO05D081110 1.2e-38 164.5 199 45.2
AL1G61110 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 3.5e-38 162.9 257 39.3
AT1G48180 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 1.0e-37 161.4 256 37.9
CARHR063260 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.6e-37 158.7 254 38.2
CARHR263650 Cardamine hirsuta HOM05D008365 ORTHO05D014862 4.3e-36 156.0 246 39.8
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.2e-35 154.5 250 37.6
CARHR063700 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.8e-34 148.7 256 37.1
BcaNung02965 Brassica carinata HOM05D008365 ORTHO05D011149 1.7e-32 144.1 157 48.4
AT5G18065 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 5.4e-31 139.0 102 64.7
CARHR063300 Cardamine hirsuta HOM05D008365 ORTHO05D116364 9.9e-25 118.2 125 49.6
BolC3t21165H Brassica oleracea HOM05D008365 ORTHO05D011149 1.2e-22 111.3 144 49.3
AT1G51670 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 4.8e-19 99.4 181 38.1
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 2.2e-16 90.5 248 28.6
BcaC09g51771 Brassica carinata HOM05D016251 ORTHO05D017520 4.2e-15 86.3 246 28.0
CARHR237830 Cardamine hirsuta HOM05D008365 ORTHO05D017520 7.1e-15 85.5 227 31.3
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 9.3e-15 85.1 265 27.2
BcaNung01345 Brassica carinata HOM05D008615 ORTHO05D021443 3.5e-14 83.2 272 27.9
BcaC09g52200 Brassica carinata HOM05D016251 ORTHO05D017520 3.9e-13 79.7 152 32.2
C01p09200 Brassica napus HOM05D016251 ORTHO05D017520 3.9e-13 79.7 152 32.2
A01p08230 Brassica napus HOM05D016251 ORTHO05D017520 5.1e-13 79.3 152 32.2
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 5.1e-13 79.3 152 32.2
CARHR063270 Cardamine hirsuta HOM05D008365 ORTHO05D116001 1.9e-12 77.4 86 50.0
Thhalv10000684m.g Eutrema salsugineum HOM05D008365 ORTHO05D017520 9.6e-12 75.1 227 27.3
C01p09880 Brassica napus HOM05D008615 ORTHO05D011779 1.6e-11 74.3 250 26.8
BolC1t00951H Brassica oleracea HOM05D008615 ORTHO05D011779 1.6e-11 74.3 250 26.8
BcaC09g52204 Brassica carinata HOM05D008615 ORTHO05D011779 3.7e-11 73.2 251 27.1
AL7G22840 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 4.8e-11 72.8 253 26.9
BraA01t00798Z Brassica rapa HOM05D008615 ORTHO05D011779 6.2e-11 72.4 250 26.4
A03p58490 Brassica napus HOM05D008615 ORTHO05D021443 1.1e-10 71.6 154 31.8
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 1.4e-10 71.2 245 25.7
AL5G23010 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 5.3e-10 69.3 157 27.4
AL4G38000 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 6.9e-10 68.9 160 28.8
AL7G36450 Arabidopsis lyrata HOM05D013859 ORTHO05D018433 1.2e-09 68.2 125 35.2
AL4G38030 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 4.5e-09 66.2 257 25.3
C01p09160 Brassica napus HOM05D000574 ORTHO05D004834 1.7e-08 64.3 237 24.5
BolC1t00907H Brassica oleracea HOM05D000574 ORTHO05D004834 1.7e-08 64.3 237 24.5
A01p08200 Brassica napus HOM05D000574 ORTHO05D004834 2.9e-08 63.5 238 23.5
BraA01t00766Z Brassica rapa HOM05D000574 ORTHO05D004834 2.9e-08 63.5 238 23.5
AL5G23100 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 1.1e-07 61.6 144 27.1
BcaC07g39853 Brassica carinata HOM05D008615 ORTHO05D011779 5.5e-07 59.3 161 28.0
BraA03t14910Z Brassica rapa HOM05D008615 ORTHO05D021443 5.5e-07 59.3 109 33.9
C02p06790 Brassica napus HOM05D013859 ORTHO05D018433 9.3e-07 58.5 192 24.5
C01p09790 Brassica napus HOM05D008615 ORTHO05D011779 4.6e-06 56.2 163 27.6
BolC1t00941H Brassica oleracea HOM05D008615 ORTHO05D011779 4.6e-06 56.2 163 27.6
BcaC03g13485 Brassica carinata HOM05D013859 ORTHO05D018433 6.0e-06 55.8 125 27.2
AT3G19515 Arabidopsis thaliana HOM05D003129 ORTHO05D004326 7.9e-06 55.5 258 23.3


User provided reference genes

Program Settings