Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.1e-39 166.0 78 100.0
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 1.3e-35 152.5 78 92.3
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.4e-31 137.5 78 82.1
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 7.5e-31 136.7 78 82.1
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 9.8e-31 136.3 78 83.3
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.3e-30 136.0 78 79.5
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.8e-30 134.8 78 78.2
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.8e-30 134.8 79 79.7
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 9.1e-29 129.8 78 78.2
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 2.0e-28 128.6 78 76.9
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 3.5e-28 127.9 77 75.3
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.5e-26 122.5 78 70.5
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.7e-25 118.2 78 71.8
CARHR237080 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.4e-24 115.9 78 69.2
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 6.8e-24 113.6 78 70.5
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 6.8e-24 113.6 78 69.2
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 6.8e-24 113.6 78 69.2
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 6.8e-24 113.6 78 69.2
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 4.4e-23 110.9 79 67.1
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 2.8e-22 108.2 78 60.3
C03p80550 Brassica napus HOM05D008236 ORTHO05D010394 7.0e-21 103.6 79 62.0
BolC3t20299H Brassica oleracea HOM05D008236 ORTHO05D010394 7.0e-21 103.6 79 62.0
A08p21920 Brassica napus HOM05D008236 ORTHO05D010394 1.2e-20 102.8 79 62.0
BraA08t34144Z Brassica rapa HOM05D008236 ORTHO05D010394 1.2e-20 102.8 79 62.0
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 1.3e-19 99.4 78 56.4
A08p21900 Brassica napus HOM05D008236 ORTHO05D010394 2.9e-19 98.2 79 62.0
BraA08t34143Z Brassica rapa HOM05D008236 ORTHO05D010394 6.6e-19 97.1 79 60.8
BraA08t33846Z Brassica rapa HOM05D008236 ORTHO05D010394 7.2e-18 93.6 79 59.5
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 1.6e-17 92.4 79 51.9
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 1.6e-17 92.4 79 51.9
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 2.1e-17 92.0 83 60.2
BcaB03g12677 Brassica carinata HOM05D008236 ORTHO05D010394 2.1e-17 92.0 79 58.2
A08p18850 Brassica napus HOM05D008236 ORTHO05D010394 2.1e-17 92.0 79 58.2
A08p18860 Brassica napus HOM05D008236 ORTHO05D010394 4.7e-17 90.9 80 57.5
BraA08t33847Z Brassica rapa HOM05D008236 ORTHO05D010394 4.7e-17 90.9 80 57.5
BcaC01g01110 Brassica carinata HOM05D008236 ORTHO05D010394 6.1e-17 90.5 79 57.0
C03p88220 Brassica napus HOM05D008236 ORTHO05D010394 6.1e-17 90.5 79 57.0
BolC3t21132H Brassica oleracea HOM05D008236 ORTHO05D010394 6.1e-17 90.5 79 57.0
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 3.0e-16 88.2 79 50.6
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.0e-16 87.8 80 57.5
BolC3t21135H Brassica oleracea HOM05D008236 ORTHO05D010394 6.8e-16 87.0 80 55.0
C03p88270 Brassica napus HOM05D008236 ORTHO05D010394 8.9e-16 86.7 80 55.0
Carub.0007s1129 Capsella rubella HOM05D008236 ORTHO05D010394 1.2e-15 86.3 80 61.2
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 2.0e-15 85.5 76 52.6
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 2.0e-15 85.5 76 52.6
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 2.0e-15 85.5 76 52.6
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 2.0e-15 85.5 76 52.6
BcaNung00445 Brassica carinata HOM05D008236 ORTHO05D010394 4.4e-15 84.3 51 70.6
AL4G18670 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 5.7e-15 84.0 82 53.7
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 1.7e-14 82.4 79 46.8
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.9e-14 80.9 79 55.7
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.3e-14 80.5 79 53.2
AT4G29273 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 8.3e-14 80.1 82 52.4
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 1.8e-13 79.0 79 45.6
AL7G23170 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.2e-12 76.3 75 48.0
AT2G22121 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.2e-12 76.3 80 50.0
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.6e-12 74.3 79 53.2
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.9e-12 73.9 78 50.0
BraA03t14925Z Brassica rapa HOM05D008236 ORTHO05D010394 1.3e-11 72.8 65 53.8
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 3.9e-11 71.2 79 40.5
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 3.9e-11 71.2 79 40.5
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.1e-10 69.7 79 49.4
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 3.3e-10 68.2 78 42.3
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 3.3e-10 68.2 78 42.3
Aa31LG2G21170 Aethionema arabicum HOM05D008236 ORTHO05D010394 4.7e-09 64.3 54 57.4
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 6.2e-09 63.9 83 42.2
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 1.4e-08 62.8 78 37.2
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 2.3e-08 62.0 78 38.5
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 2.3e-08 62.0 78 38.5
AL8G22100 Arabidopsis lyrata HOM05D010086 ORTHO05D010053 4.0e-08 61.2 78 33.3
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 6.8e-08 60.5 78 37.2
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 6.8e-08 60.5 78 37.2
Carub.0008s0863 Capsella rubella HOM05D010086 ORTHO05D010053 1.5e-07 59.3 78 38.5
AT5G48905 Arabidopsis thaliana HOM05D010086 ORTHO05D010053 2.0e-07 58.9 72 33.3
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 2.0e-07 58.9 81 39.5
C07p39500 Brassica napus HOM05D010086 ORTHO05D010053 2.6e-07 58.5 78 35.9
BolC7t44469H Brassica oleracea HOM05D010086 ORTHO05D010053 2.6e-07 58.5 78 35.9
Thhalv10005401m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 4.4e-07 57.8 78 34.6
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 5.8e-07 57.4 81 38.3
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 5.8e-07 57.4 81 38.3
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 5.8e-07 57.4 81 38.3
EL10Ac8g18638 Beta vulgaris HOM05D010086 ORTHO05D010053 3.7e-06 54.7 78 38.5
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 6.4e-06 53.9 81 37.0


User provided reference genes

Program Settings