Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.5e-42 173.7 78 100.0
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.3e-38 160.2 78 91.0
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 3.0e-32 141.4 78 82.1
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 3.4e-31 137.9 78 79.5
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 1.8e-29 132.1 78 79.5
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.8e-29 132.1 78 75.6
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 3.5e-28 127.9 79 75.9
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 5.9e-28 127.1 77 74.0
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 2.2e-27 125.2 78 76.9
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 2.9e-27 124.8 78 73.1
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 3.8e-27 124.4 78 74.4
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.5e-27 123.6 78 70.5
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.6e-25 119.0 78 69.2
CARHR237080 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.8e-22 108.2 78 64.1
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 8.3e-22 106.7 78 62.8
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 8.3e-22 106.7 78 62.8
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 8.3e-22 106.7 78 62.8
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 1.1e-21 106.3 78 64.1
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 4.1e-21 104.4 78 60.3
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 3.8e-19 97.8 79 59.5
BolC3t20299H Brassica oleracea HOM05D008236 ORTHO05D010394 1.5e-18 95.9 79 55.7
A08p21920 Brassica napus HOM05D008236 ORTHO05D010394 2.5e-18 95.1 79 55.7
C03p80550 Brassica napus HOM05D008236 ORTHO05D010394 2.5e-18 95.1 79 55.7
BraA08t34144Z Brassica rapa HOM05D008236 ORTHO05D010394 2.5e-18 95.1 79 55.7
BcaNung00445 Brassica carinata HOM05D008236 ORTHO05D010394 5.5e-18 94.0 51 74.5
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 5.5e-18 94.0 79 51.9
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 5.5e-18 94.0 79 51.9
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 7.2e-18 93.6 79 51.9
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 9.5e-18 93.2 78 53.8
A08p21900 Brassica napus HOM05D008236 ORTHO05D010394 6.1e-17 90.5 79 55.7
BraA08t34143Z Brassica rapa HOM05D008236 ORTHO05D010394 6.1e-17 90.5 79 55.7
A08p18850 Brassica napus HOM05D008236 ORTHO05D010394 8.0e-17 90.1 79 57.0
BraA08t33846Z Brassica rapa HOM05D008236 ORTHO05D010394 1.4e-16 89.4 79 55.7
BcaC01g01110 Brassica carinata HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 55.7
C03p88220 Brassica napus HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 55.7
BolC3t21132H Brassica oleracea HOM05D008236 ORTHO05D010394 1.8e-16 89.0 79 55.7
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 2.3e-16 88.6 76 53.9
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 2.3e-16 88.6 76 53.9
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 2.3e-16 88.6 76 53.9
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 2.3e-16 88.6 76 53.9
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 3.0e-16 88.2 83 56.6
A08p18860 Brassica napus HOM05D008236 ORTHO05D010394 3.0e-16 88.2 80 57.5
BolC3t21135H Brassica oleracea HOM05D008236 ORTHO05D010394 3.0e-16 88.2 80 56.2
BraA08t33847Z Brassica rapa HOM05D008236 ORTHO05D010394 3.0e-16 88.2 80 57.5
BcaB03g12677 Brassica carinata HOM05D008236 ORTHO05D010394 4.0e-16 87.8 79 55.7
C03p88270 Brassica napus HOM05D008236 ORTHO05D010394 6.8e-16 87.0 80 56.2
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 8.9e-16 86.7 79 49.4
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 9.8e-15 83.2 79 48.1
Carub.0007s1129 Capsella rubella HOM05D008236 ORTHO05D010394 1.7e-14 82.4 80 57.5
AL7G23170 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 4.9e-14 80.9 76 56.6
AT4G29273 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.3e-14 80.5 79 54.4
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.3e-14 80.5 80 55.0
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 1.1e-13 79.7 81 46.9
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 1.1e-13 79.7 81 46.9
AL4G18670 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.4e-13 79.3 82 53.7
BraA03t14925Z Brassica rapa HOM05D008236 ORTHO05D010394 1.8e-13 79.0 45 68.9
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.2e-12 76.3 80 50.0
Aa31LG2G21170 Aethionema arabicum HOM05D008236 ORTHO05D010394 1.7e-11 72.4 54 63.0
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.0e-11 70.9 78 50.0
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.6e-11 70.5 79 51.9
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.3e-10 68.2 78 51.3
AT2G22121 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 5.6e-10 67.4 80 45.0
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 5.6e-10 67.4 78 41.0
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 5.6e-10 67.4 78 41.0
A09p04690 Brassica napus HOM05D010086 ORTHO05D010053 9.5e-10 66.6 78 42.3
BraA09t36106Z Brassica rapa HOM05D010086 ORTHO05D010053 9.5e-10 66.6 78 42.3
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 3.6e-09 64.7 79 48.1
AL8G22100 Arabidopsis lyrata HOM05D010086 ORTHO05D010053 8.0e-09 63.5 78 35.9
C09p05000 Brassica napus HOM05D010086 ORTHO05D010053 8.0e-09 63.5 78 41.0
BolC9t53429H Brassica oleracea HOM05D010086 ORTHO05D010053 8.0e-09 63.5 78 41.0
Thhalv10005578m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 1.4e-08 62.8 78 38.5
CARHR183110 Cardamine hirsuta HOM05D010086 ORTHO05D010053 1.8e-08 62.4 78 38.5
Nn3g17741 Nelumbo nucifera HOM05D014595 ORTHO05D015167 5.2e-08 60.8 77 44.2
C07p39500 Brassica napus HOM05D010086 ORTHO05D010053 1.5e-07 59.3 78 37.2
BolC7t44469H Brassica oleracea HOM05D010086 ORTHO05D010053 1.5e-07 59.3 78 37.2
CARHR182780 Cardamine hirsuta HOM05D010086 ORTHO05D010053 4.4e-07 57.8 78 35.9
Nn1g09088 Nelumbo nucifera HOM05D014595 ORTHO05D015167 9.8e-07 56.6 77 41.6
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 1.3e-06 56.2 84 39.3
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 1.3e-06 56.2 81 39.5
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 1.3e-06 56.2 81 39.5
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 1.3e-06 56.2 81 39.5
Thhalv10005401m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 2.2e-06 55.5 78 34.6
Thhalv10026716m.g Eutrema salsugineum HOM05D009471 ORTHO05D011939 2.9e-06 55.1 81 38.3
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 6.4e-06 53.9 81 38.3
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 6.4e-06 53.9 81 38.3
Carub.0007s1132 Capsella rubella HOM05D009471 ORTHO05D011939 8.3e-06 53.5 81 37.0


User provided reference genes

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