Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29285 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 1.6e-38 162.2 77 100.0
AL7G23160 Arabidopsis lyrata HOM05D009471 ORTHO05D011939 4.8e-30 134.0 65 92.3
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 1.4e-29 132.5 77 75.3
CARHR237030 Cardamine hirsuta HOM05D009471 ORTHO05D011939 6.5e-27 123.6 78 73.1
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 3.2e-26 121.3 78 73.1
Thhalv10026716m.g Eutrema salsugineum HOM05D009471 ORTHO05D011939 1.0e-24 116.3 77 68.8
BolC7t46162H Brassica oleracea HOM05D009471 ORTHO05D011939 2.1e-22 108.6 77 64.9
A03p58880 Brassica napus HOM05D009471 ORTHO05D011939 4.8e-22 107.5 77 63.6
BraA03t14948Z Brassica rapa HOM05D009471 ORTHO05D011939 4.8e-22 107.5 77 63.6
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 4.8e-22 107.5 79 67.1
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 1.1e-21 106.3 79 65.8
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 1.4e-21 105.9 79 65.8
A03p58890 Brassica napus HOM05D009471 ORTHO05D011939 6.9e-21 103.6 79 64.6
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 6.9e-21 103.6 79 64.6
BraA03t14949Z Brassica rapa HOM05D009471 ORTHO05D011939 6.9e-21 103.6 79 64.6
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 2.0e-20 102.1 79 63.3
BraA07t30656Z Brassica rapa HOM05D009471 ORTHO05D011939 2.5e-18 95.1 77 59.7
BolC6t38591H Brassica oleracea HOM05D009471 ORTHO05D011939 7.2e-18 93.6 77 59.7
BolC7t46163H Brassica oleracea HOM05D009471 ORTHO05D011939 1.2e-17 92.8 64 68.8
C06p34890 Brassica napus HOM05D009471 ORTHO05D011939 2.1e-17 92.0 77 58.4
Carub.0007s1132 Capsella rubella HOM05D009471 ORTHO05D011939 2.7e-17 91.7 77 55.8
A07p30190 Brassica napus HOM05D009471 ORTHO05D011939 3.6e-17 91.3 77 57.1
C07p56850 Brassica napus HOM05D009471 ORTHO05D011939 1.8e-16 89.0 58 65.5
C06p34930 Brassica napus HOM05D009471 ORTHO05D011939 3.9e-16 87.8 77 57.1
Aa31LG2G21160 Aethionema arabicum HOM05D009471 ORTHO05D011939 1.5e-12 75.9 83 49.4
AL7G34020 Arabidopsis lyrata HOM05D009471 ORTHO05D038604 7.7e-12 73.6 78 51.3
AT4G19905 Arabidopsis thaliana HOM05D009471 ORTHO05D038604 1.1e-10 69.7 79 48.1
CARHR237040 Cardamine hirsuta HOM05D009471 ORTHO05D011939 2.5e-10 68.6 78 48.7
Thhalv10005401m.g Eutrema salsugineum HOM05D010086 ORTHO05D010053 3.3e-07 58.2 80 36.2
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 7.4e-07 57.0 82 41.5
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 9.7e-07 56.6 82 41.5
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 9.7e-07 56.6 82 41.5
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 9.7e-07 56.6 82 41.5
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 9.7e-07 56.6 82 41.5
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 1.3e-06 56.2 83 39.8
Sopen10g013920 Solanum pennellii HOM05D010058 ORTHO05D010053 4.8e-06 54.3 79 40.5


User provided reference genes

Program Settings