Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29273 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.7e-41 171.4 78 100.0
AL4G18670 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 2.2e-35 151.8 78 88.5
Carub.0007s1129 Capsella rubella HOM05D008236 ORTHO05D010394 1.4e-21 105.9 80 66.2
Thhalv10027564m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 4.1e-21 104.4 82 64.6
AT2G22121 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 7.0e-21 103.6 82 62.2
AL4G11440 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.5e-20 101.3 82 62.2
AL6G42890 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.3e-19 99.4 78 66.7
AT4G29280 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.3e-19 99.4 81 63.0
AL6G42900 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.6e-19 97.1 81 65.4
A01p08760 Brassica napus HOM05D008236 ORTHO05D010394 5.5e-18 94.0 79 54.4
BraA01t00826Z Brassica rapa HOM05D008236 ORTHO05D010394 5.5e-18 94.0 79 54.4
BcaC05g26821 Brassica carinata HOM05D008236 ORTHO05D010394 7.2e-18 93.6 76 52.6
A09p37890 Brassica napus HOM05D008236 ORTHO05D010394 7.2e-18 93.6 76 52.6
C05p26930 Brassica napus HOM05D008236 ORTHO05D010394 7.2e-18 93.6 76 52.6
BraA09t39301Z Brassica rapa HOM05D008236 ORTHO05D010394 7.2e-18 93.6 76 52.6
AL7G23170 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 6.1e-17 90.5 76 60.5
CARHR237050 Cardamine hirsuta HOM05D008236 ORTHO05D010394 8.0e-17 90.1 83 56.6
AT4G09153 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 1.4e-16 89.4 81 59.3
Carub.0007s1126 Capsella rubella HOM05D008236 ORTHO05D010394 4.0e-16 87.8 82 54.9
Thhalv10026870m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 5.2e-16 87.4 82 56.1
AT4G29283 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 6.8e-16 87.0 77 53.2
C01p10280 Brassica napus HOM05D008236 ORTHO05D010394 8.9e-16 86.7 79 51.9
AT4G29305 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.2e-14 82.0 82 52.4
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 2.9e-14 81.6 82 52.4
AT4G29290 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 3.7e-14 81.3 79 54.4
Carub.0007s1127 Capsella rubella HOM05D008236 ORTHO05D010394 6.3e-14 80.5 81 49.4
AL7G23150 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 1.1e-13 79.7 79 53.2
BolC1t00984H Brassica oleracea HOM05D008236 ORTHO05D010394 1.1e-13 79.7 79 46.8
Thhalv10027145m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 1.4e-13 79.3 82 54.9
C01p10300 Brassica napus HOM05D008236 ORTHO05D010394 7.0e-13 77.0 79 46.8
A01p08740 Brassica napus HOM05D008236 ORTHO05D010394 1.7e-11 72.4 79 43.0
BraA01t00824Z Brassica rapa HOM05D008236 ORTHO05D010394 1.7e-11 72.4 79 43.0
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 3.9e-11 71.2 82 50.0
Aa31LG2G21150 Aethionema arabicum HOM05D008236 ORTHO05D010394 7.3e-10 67.0 83 44.6
THA.LOC109116902 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.2e-09 66.2 78 42.3
THA.LOC109116887 Tarenaya hassleriana HOM05D010086 ORTHO05D010053 1.6e-09 65.9 78 42.3
CARHR237090 Cardamine hirsuta HOM05D008236 ORTHO05D010394 2.1e-09 65.5 82 47.6
Thhalv10023924m.g Eutrema salsugineum HOM05D008236 ORTHO05D010394 2.8e-09 65.1 82 45.1
BcaB03g12409 Brassica carinata HOM05D008236 ORTHO05D010394 3.6e-09 64.7 82 43.9
BcaC01g00492 Brassica carinata HOM05D008236 ORTHO05D010394 4.7e-09 64.3 82 45.1
C03p80630 Brassica napus HOM05D008236 ORTHO05D010394 4.7e-09 64.3 82 45.1
BolC3t20306H Brassica oleracea HOM05D008236 ORTHO05D010394 4.7e-09 64.3 82 45.1
CARHR237060 Cardamine hirsuta HOM05D008236 ORTHO05D010394 1.0e-08 63.2 82 46.3
BraA08t33848Z Brassica rapa HOM05D008236 ORTHO05D010394 1.2e-07 59.7 82 41.5
Aa31LG2G21170 Aethionema arabicum HOM05D008236 ORTHO05D010394 2.0e-07 58.9 63 46.0
A06p38820 Brassica napus HOM05D010086 ORTHO05D010053 9.8e-07 56.6 78 35.9
Lalb_Chr01g0006151 Lupinus albus HOM05D011857 ORTHO05D010053 2.2e-06 55.5 79 35.4
BcaNung00445 Brassica carinata HOM05D008236 ORTHO05D010394 3.7e-06 54.7 79 39.2
BraA06t26798Z Brassica rapa HOM05D010086 ORTHO05D010053 4.9e-06 54.3 78 35.9


User provided reference genes

Program Settings