Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.0e-123 446.8 231 100.0
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.7e-118 428.3 231 94.8
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 8.2e-118 427.2 229 93.9
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 5.3e-117 424.5 231 95.2
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 1.4e-114 416.4 232 91.8
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 9.4e-114 413.7 233 92.3
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 3.6e-113 411.8 233 91.4
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 3.6e-113 411.8 233 91.4
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 3.0e-112 408.7 230 88.3
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.0e-112 408.7 232 91.4
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 6.9e-109 397.5 259 82.2
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 3.2e-106 388.7 218 92.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 9.7e-103 377.1 231 81.8
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 2.4e-93 345.9 216 81.9
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 7.7e-92 340.9 215 79.1
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.7e-91 339.7 212 79.7
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.2e-91 339.3 210 80.5
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.2e-91 339.3 208 80.8
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 3.8e-91 338.6 208 80.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 5.0e-91 338.2 222 76.1
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 5.0e-91 338.2 215 77.7
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 5.0e-91 338.2 215 80.5
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.1e-90 337.0 209 79.4
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.1e-90 337.0 215 79.5
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-90 336.7 207 80.7
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.5e-90 336.7 208 80.8
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.9e-90 336.3 221 76.0
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.9e-90 336.3 220 76.4
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.9e-90 336.3 220 76.4
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 2.5e-90 335.9 215 80.0
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 3.2e-90 335.5 219 76.3
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 3.2e-90 335.5 213 77.5
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 5.5e-90 334.7 215 78.1
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 7.2e-90 334.3 207 80.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 7.2e-90 334.3 207 80.2
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.2e-89 333.6 215 77.7
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.2e-89 333.6 208 77.9
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.2e-89 333.6 209 78.5
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.2e-89 333.6 215 76.7
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.7e-89 332.4 241 71.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.7e-89 332.4 241 71.8
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.7e-89 332.4 218 78.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.7e-89 332.4 207 79.7
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 3.6e-89 332.0 212 76.9
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.7e-89 331.6 215 77.7
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 6.1e-89 331.3 212 77.4
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.0e-88 330.5 218 75.7
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.0e-88 330.5 207 78.7
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.0e-88 330.5 216 75.9
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.4e-88 330.1 215 77.2
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.4e-88 330.1 208 80.3
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.8e-88 329.7 208 78.8
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 3.0e-88 328.9 208 79.8
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.0e-88 328.9 210 78.6
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 4.0e-88 328.6 216 77.3
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 5.2e-88 328.2 208 76.9
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.8e-88 327.4 210 78.1
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.8e-88 327.4 210 78.1
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.2e-87 327.0 209 78.0
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 1.2e-87 327.0 208 77.4
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.5e-87 326.6 208 77.9
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.6e-87 325.9 217 77.4
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 5.7e-87 324.7 206 77.2
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.3e-86 323.6 222 74.8
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.2e-86 322.8 211 75.4
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 2.8e-86 322.4 200 80.0
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 2.8e-86 322.4 234 71.4
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 3.7e-86 322.0 218 74.8
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.7e-86 322.0 210 76.2
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.4e-85 319.3 207 75.8
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.4e-85 319.3 217 75.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.4e-85 319.3 217 75.1
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 5.9e-84 314.7 193 78.8
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 7.7e-84 314.3 197 78.2
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 7.7e-84 314.3 195 78.5
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.1e-82 310.5 207 74.4
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.9e-82 309.7 207 73.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 4.2e-82 308.5 215 76.7
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 5.5e-82 308.1 195 80.0
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.6e-81 306.6 193 77.7
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.6e-81 306.6 199 77.4
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 2.1e-81 306.2 206 74.3
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.8e-80 303.1 229 70.7
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 2.6e-79 299.3 207 71.5
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 3.7e-78 295.4 193 74.1
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 4.9e-78 295.0 215 72.1
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 8.3e-78 294.3 215 73.5
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.7e-75 286.6 183 77.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.3e-74 282.3 207 67.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 8.0e-73 277.7 206 65.0
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 8.9e-72 274.2 196 71.9
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.0e-71 273.1 207 66.2
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 5.8e-71 271.6 217 66.4
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.9e-70 268.5 173 79.8
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 8.3e-70 267.7 207 64.7
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-69 266.9 218 68.3
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.0e-68 263.1 170 78.2
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 4.7e-65 251.9 202 68.3
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 4.4e-63 245.4 173 72.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 9.8e-63 244.2 230 59.6
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 5.4e-61 238.4 153 80.4
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 7.0e-61 238.0 206 61.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.2e-56 221.9 145 73.1
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 6.8e-56 221.5 143 79.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.2e-53 212.6 138 81.2
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 7.1e-53 211.5 113 95.6
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 9.5e-50 201.1 110 90.0
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 3.5e-44 182.6 184 57.6
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 5.6e-42 175.3 120 75.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.4e-40 170.6 131 67.2
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 4.2e-37 159.1 214 48.1
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.7e-35 153.7 115 69.6
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 5.6e-34 148.7 108 71.3
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.9e-30 136.3 204 38.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 3.8e-30 136.0 101 74.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 6.4e-30 135.2 101 73.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.2e-29 132.5 209 38.3
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 3.5e-28 129.4 196 37.8
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.7e-20 103.2 81 67.9
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 7.4e-18 95.1 76 61.8
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 2.8e-17 93.2 69 58.0
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 8.4e-14 81.6 41 82.9


User provided reference genes

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