Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29033 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 2.0e-42 175.3 82 100.0
AL7G23420 Arabidopsis lyrata HOM05D008647 ORTHO05D010896 2.1e-39 165.2 82 93.9
Carub.0007s1160 Capsella rubella HOM05D008647 ORTHO05D010896 4.0e-35 151.0 82 84.1
Thhalv10015439m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 5.1e-30 134.0 81 76.5
CARHR236760 Cardamine hirsuta HOM05D008647 ORTHO05D010896 1.9e-29 132.1 77 77.9
C03p19620 Brassica napus HOM05D008647 ORTHO05D010896 4.6e-23 110.9 83 66.3
BolC3t14342H Brassica oleracea HOM05D008647 ORTHO05D010896 4.6e-23 110.9 83 66.3
A03p16670 Brassica napus HOM05D008647 ORTHO05D010896 7.9e-23 110.2 83 65.1
BraA03t10953Z Brassica rapa HOM05D008647 ORTHO05D010896 7.9e-23 110.2 83 65.1
Thhalv10023953m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 1.2e-15 86.3 73 56.2
Thhalv10026922m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 3.5e-15 84.7 73 56.2
C08p11150 Brassica napus HOM05D008647 ORTHO05D010896 5.7e-13 77.4 74 52.7
CARHR049960 Cardamine hirsuta HOM05D008647 ORTHO05D017692 3.7e-12 74.7 77 45.5
BcaC07g38367 Brassica carinata HOM05D008647 ORTHO05D010896 1.4e-11 72.8 66 50.0
BolC8t48785H Brassica oleracea HOM05D008647 ORTHO05D010896 2.4e-11 72.0 77 45.5
Carub.0005s0246 Capsella rubella HOM05D008647 ORTHO05D010896 9.0e-11 70.1 74 45.9
A08p19810 Brassica napus HOM05D008647 ORTHO05D010896 1.5e-10 69.3 74 52.7
BraA08t33941Z Brassica rapa HOM05D008647 ORTHO05D010896 1.5e-10 69.3 74 52.7
C08p11200 Brassica napus HOM05D008647 ORTHO05D010896 3.4e-10 68.2 74 51.4
THA.LOC109116700 Tarenaya hassleriana HOM05D008647 ORTHO05D010896 4.5e-10 67.8 74 47.3
Aa31LG2G21360 Aethionema arabicum HOM05D008647 ORTHO05D010896 2.2e-09 65.5 44 54.5
A08p19840 Brassica napus HOM05D008647 ORTHO05D010896 2.2e-09 65.5 75 48.0
BolC8t48787H Brassica oleracea HOM05D008647 ORTHO05D010896 2.2e-09 65.5 75 48.0
BolC8t48793H Brassica oleracea HOM05D008647 ORTHO05D010896 2.2e-09 65.5 75 49.3
BraA08t33943Z Brassica rapa HOM05D008647 ORTHO05D010896 2.2e-09 65.5 75 48.0
Thhalv10026914m.g Eutrema salsugineum HOM05D008647 ORTHO05D010896 2.9e-09 65.1 75 44.0
BolC6t36908H Brassica oleracea HOM05D008647 ORTHO05D010896 3.8e-09 64.7 74 44.6
AT1G35537 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 5.0e-09 64.3 79 44.3
A05p16670 Brassica napus HOM05D008647 ORTHO05D010896 8.4e-09 63.5 74 41.9
C08p11160 Brassica napus HOM05D008647 ORTHO05D010896 1.9e-08 62.4 75 46.7
Carub.0007s0275 Capsella rubella HOM05D008647 ORTHO05D010896 1.9e-08 62.4 79 40.5
AT3G27831 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 5.5e-08 60.8 78 41.0
CARHR178680 Cardamine hirsuta HOM05D008647 ORTHO05D010896 7.1e-08 60.5 67 43.3
A09p16520 Brassica napus HOM05D030127 ORTHO05D017692 1.2e-07 59.7 76 40.8
C09p20060 Brassica napus HOM05D030127 ORTHO05D017692 1.2e-07 59.7 76 40.8
BolC9t54915H Brassica oleracea HOM05D030127 ORTHO05D017692 1.2e-07 59.7 76 40.8
BraA09t37289Z Brassica rapa HOM05D030127 ORTHO05D017692 1.2e-07 59.7 76 40.8
AT3G27835 Arabidopsis thaliana HOM05D008647 ORTHO05D010896 2.7e-07 58.5 80 38.8
Carub.0001s3316 Capsella rubella HOM05D008647 ORTHO05D010896 1.8e-06 55.8 77 40.3
Actinidia30099 Actinidia chinensis HOM05D017988 ORTHO05D010896 2.3e-06 55.5 67 44.8


User provided reference genes

Program Settings