Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G29030 Arabidopsis thaliana HOM05D008344 ORTHO05D006413 6.5e-31 137.5 75 100.0
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 5.5e-30 134.4 75 92.0
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 7.4e-27 124.0 77 87.0
Thhalv10026613m.g Eutrema salsugineum HOM05D008344 ORTHO05D006413 1.4e-25 119.8 74 83.8
Sp7g26970 Schrenkiella parvula HOM05D008344 ORTHO05D006413 1.0e-23 113.6 75 78.7
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 5.0e-23 111.3 75 77.3
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 5.0e-23 111.3 75 77.3
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 1.1e-22 110.2 75 76.0
BolC1t01011H Brassica oleracea HOM05D008344 ORTHO05D006413 1.5e-22 109.8 75 76.0
A03p58660 Brassica napus HOM05D008344 ORTHO05D006413 3.2e-22 108.6 75 76.0
BraA03t14927Z Brassica rapa HOM05D008344 ORTHO05D006413 3.2e-22 108.6 75 76.0
BcaC07g38365 Brassica carinata HOM05D008344 ORTHO05D006413 1.6e-21 106.3 75 73.3
C08p11130 Brassica napus HOM05D008344 ORTHO05D006413 1.6e-21 106.3 75 73.3
BolC8t48782H Brassica oleracea HOM05D008344 ORTHO05D006413 3.6e-21 105.1 75 72.0
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 8.0e-21 104.0 69 75.4
BcaB03g12592 Brassica carinata HOM05D008344 ORTHO05D006413 5.2e-20 101.3 75 73.3
BolC8t48789H Brassica oleracea HOM05D008344 ORTHO05D006413 8.8e-20 100.5 73 71.2
BcaC09g51682 Brassica carinata HOM05D008344 ORTHO05D006413 8.3e-18 94.0 62 77.4
C07p56610 Brassica napus HOM05D008344 ORTHO05D006413 5.3e-17 91.3 55 81.8
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 5.9e-08 61.2 60 63.3
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 1.0e-07 60.5 62 59.7
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 1.0e-07 60.5 62 61.3
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 3.8e-07 58.5 59 59.3
THA.LOC104804024 Tarenaya hassleriana HOM05D008344 ORTHO05D006413 3.8e-07 58.5 52 59.6
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 5.0e-07 58.2 51 66.7
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 6.6e-07 57.8 53 62.3
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 8.6e-07 57.4 51 64.7
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 1.1e-06 57.0 59 54.2
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.9e-06 56.2 59 64.4
Medtr1g069085 Medicago truncatula HOM05D007427 ORTHO05D006413 1.9e-06 56.2 59 55.9
Lalb_Chr25g0289621 Lupinus albus HOM05D007427 ORTHO05D006413 2.5e-06 55.8 57 61.4
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 4.2e-06 55.1 71 50.7
FAN15G2923 Fragaria x ananassa HOM05D007427 ORTHO05D006413 9.5e-06 53.9 54 53.7
FAN27G1788 Fragaria x ananassa HOM05D007427 ORTHO05D006413 9.5e-06 53.9 54 53.7
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 9.5e-06 53.9 69 52.2


User provided reference genes

Program Settings