Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.2e-212 743.0 403 100.0
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.5e-194 682.2 407 93.6
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.1e-181 638.3 410 86.6
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 1.4e-165 586.6 423 81.8
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 2.9e-163 578.9 433 78.8
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 7.5e-151 537.7 430 75.3
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 1.2e-145 520.4 407 76.4
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 5.0e-139 498.4 409 74.6
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 1.1e-133 480.7 408 72.5
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 6.8e-128 461.5 408 70.6
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 1.5e-127 460.3 408 70.3
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 3.8e-126 455.7 410 69.8
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 1.2e-121 440.7 426 62.9
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 1.8e-120 436.8 434 65.0
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 4.3e-90 335.9 465 50.3
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.3e-89 334.3 457 50.1
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.2e-89 333.6 457 49.9
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 3.7e-89 332.8 450 52.0
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 2.4e-88 330.1 457 49.7
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 8.7e-83 311.6 452 49.8
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 1.5e-82 310.8 459 49.5
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 1.1e-80 304.7 446 50.2
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 1.4e-77 294.3 458 47.8
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.9e-77 293.9 462 47.8
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 4.2e-77 292.7 448 47.8
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.2e-76 291.2 450 47.1
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 3.0e-75 286.6 447 47.9
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 2.6e-74 283.5 466 45.9
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 4.8e-73 279.3 435 45.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 1.1e-72 278.1 432 45.8
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 9.1e-72 275.0 424 48.1
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 5.9e-71 272.3 444 44.1
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 5.0e-70 269.2 453 45.5
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 6.5e-70 268.9 414 46.4
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 2.5e-69 266.9 414 46.1
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 7.2e-69 265.4 445 45.6
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 2.1e-68 263.8 448 45.3
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 6.1e-68 262.3 439 46.7
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 2.3e-67 260.4 452 44.0
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 5.2e-67 259.2 439 45.3
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 8.8e-67 258.5 439 45.3
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 1.5e-66 257.7 459 44.2
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 1.5e-66 257.7 461 46.0
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 3.3e-66 256.5 446 44.6
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 1.3e-65 254.6 464 43.3
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 1.7e-65 254.2 449 43.2
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 2.2e-65 253.8 464 44.0
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 2.8e-65 253.4 456 43.9
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 4.8e-65 252.7 460 44.1
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 8.2e-65 251.9 468 41.7
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 2.4e-64 250.4 451 44.3
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 4.1e-64 249.6 482 43.4
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 7.0e-64 248.8 476 42.4
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 9.1e-64 248.4 480 43.5
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 3.5e-63 246.5 480 43.1
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.9e-61 240.7 495 40.6
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.1e-60 237.3 471 40.8
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 1.0e-59 235.0 456 41.9
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.4e-59 234.6 490 41.6
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 2.3e-59 233.8 475 40.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 5.2e-59 232.6 442 40.5
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 2.0e-58 230.7 467 40.5
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 5.7e-58 229.2 475 41.3
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 3.7e-57 226.5 435 41.6
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.4e-56 224.6 460 40.2
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.2e-55 221.5 462 39.2
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 1.2e-55 221.5 396 43.7
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 2.0e-55 220.7 445 41.8
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 2.9e-54 216.9 484 39.7
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 2.5e-53 213.8 492 37.8
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 5.5e-53 212.6 460 39.1
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 3.6e-52 209.9 420 41.0
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 3.6e-52 209.9 460 40.9
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 6.1e-52 209.1 420 40.0
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 8.0e-52 208.8 329 45.3
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 1.0e-51 208.4 464 36.2
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 4.0e-51 206.5 465 38.3
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.5e-50 204.5 424 39.4
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 3.4e-50 203.4 426 38.7
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 7.5e-50 202.2 455 37.1
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.8e-48 197.6 311 47.3
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 3.8e-46 189.9 441 37.4
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 1.1e-45 188.3 478 36.4
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 2.6e-42 177.2 458 36.2
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 3.1e-40 170.2 434 38.2
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 5.4e-40 169.5 457 36.3
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 1.3e-38 164.9 443 35.9
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 1.3e-38 164.9 408 39.0
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-38 164.5 437 37.1
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.9e-38 163.7 510 32.5
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 1.5e-37 161.4 402 36.8
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 4.3e-37 159.8 387 36.2
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 5.6e-37 159.5 376 37.0
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 5.6e-37 159.5 411 37.7
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.3e-37 159.1 445 36.0
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 3.6e-36 156.8 409 36.9
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 1.0e-35 155.2 458 34.3
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 3.4e-34 150.2 404 36.4
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 4.9e-33 146.4 495 35.6
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 2.7e-31 140.6 502 34.9
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 1.7e-30 137.9 343 36.2
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 1.1e-29 135.2 437 35.2
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 4.7e-28 129.8 379 33.5
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.1e-27 128.6 411 36.0
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 1.6e-23 114.8 443 33.0
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 7.8e-23 112.5 495 30.5
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 3.3e-21 107.1 413 32.7
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 9.2e-16 89.0 148 44.6
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.2e-15 88.6 433 30.9
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 2.7e-15 87.4 385 32.7
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 6.6e-14 82.8 174 43.7
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 1.8e-11 74.7 162 39.5
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 8.9e-11 72.4 439 26.9
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.4e-08 65.1 150 38.7
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 5.1e-06 56.6 129 38.8


User provided reference genes

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