Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 4.6e-80 301.2 158 100.0
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 8.5e-74 280.4 158 93.0
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 3.0e-71 271.9 158 91.8
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 4.2e-65 251.5 161 84.5
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 5.3e-60 234.6 164 81.1
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 7.7e-59 230.7 161 80.1
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 1.0e-58 230.3 158 79.7
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.5e-57 226.5 161 79.5
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 7.2e-57 224.2 160 79.4
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 7.2e-57 224.2 160 79.4
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.4e-55 219.9 166 76.5
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 7.5e-54 214.2 166 74.7
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 2.2e-53 212.6 166 74.7
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 6.3e-53 211.1 165 73.9
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 2.4e-52 209.1 166 73.5
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 9.4e-49 197.2 119 86.6
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.5e-46 187.6 160 71.2
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 7.0e-36 154.5 155 62.6
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 3.3e-33 145.6 136 59.6
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 5.6e-33 144.8 153 58.8
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 4.7e-32 141.7 122 64.8
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.0e-31 140.6 154 55.8
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 1.0e-31 140.6 139 56.1
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.4e-31 140.2 154 55.8
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 2.3e-31 139.4 125 61.6
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.0e-31 139.0 121 64.5
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 8.9e-31 137.5 121 62.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 8.9e-31 137.5 120 63.3
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 8.9e-31 137.5 143 60.8
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 1.2e-30 137.1 137 59.1
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.5e-30 136.7 154 53.2
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 3.4e-30 135.6 115 61.7
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 3.4e-30 135.6 139 56.1
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 4.4e-30 135.2 137 56.2
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 5.7e-30 134.8 154 53.9
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 7.5e-30 134.4 149 56.4
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 7.5e-30 134.4 126 59.5
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 9.8e-30 134.0 123 61.8
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 3.7e-29 132.1 119 59.7
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 3.7e-29 132.1 145 53.8
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 4.9e-29 131.7 115 63.5
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 8.3e-29 131.0 115 62.6
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 8.3e-29 131.0 115 61.7
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 1.1e-28 130.6 134 56.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 3.2e-28 129.0 121 58.7
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 4.1e-28 128.6 115 63.5
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 4.1e-28 128.6 154 53.2
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 7.0e-28 127.9 125 59.2
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 9.2e-28 127.5 132 57.6
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 1.2e-27 127.1 111 62.2
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.2e-27 127.1 115 60.9
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 1.6e-27 126.7 144 52.1
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.0e-27 126.3 104 67.3
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 2.0e-27 126.3 111 63.1
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 5.9e-27 124.8 115 61.7
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 5.9e-27 124.8 97 71.1
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 1.3e-26 123.6 140 52.9
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 3.0e-26 122.5 115 58.3
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 3.0e-26 122.5 113 59.3
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 8.6e-26 120.9 122 55.7
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.9e-25 119.8 116 56.0
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 3.3e-25 119.0 103 62.1
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 4.3e-25 118.6 82 73.2
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 1.2e-24 117.1 130 53.1
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.2e-24 117.1 95 66.3
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.1e-24 116.3 95 65.3
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 2.8e-24 115.9 120 55.0
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 3.6e-24 115.5 101 61.4
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 3.6e-24 115.5 143 49.7
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 6.2e-24 114.8 137 53.3
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.0e-23 114.0 115 58.3
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.4e-23 113.6 115 56.5
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.8e-23 113.2 144 50.7
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 2.3e-23 112.8 127 54.3
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 2.3e-23 112.8 143 49.7
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.0e-23 112.1 130 53.8
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 8.9e-23 110.9 61 88.5
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.2e-22 110.5 126 53.2
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 1.2e-22 110.5 122 54.1
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.5e-22 110.2 101 61.4
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 3.4e-22 109.0 157 46.5
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 9.8e-22 107.5 83 71.1
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.7e-21 106.7 81 65.4
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 2.2e-21 106.3 121 56.2
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 2.2e-21 106.3 104 60.6
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 3.7e-21 105.5 95 62.1
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 1.1e-20 104.0 148 48.6
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.1e-20 104.0 115 53.0
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 5.4e-20 101.7 135 51.1
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 9.2e-20 100.9 110 53.6
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.7e-19 99.4 71 71.8
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 4.6e-19 98.6 70 71.4
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.0e-18 97.4 92 58.7
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 2.3e-18 96.3 84 61.9
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 2.3e-18 96.3 80 57.5
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 1.5e-17 93.6 148 43.2
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.9e-17 93.2 108 49.1
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.5e-17 92.8 80 58.8
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.5e-17 92.8 113 47.8
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 2.5e-17 92.8 71 69.0
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 3.6e-16 89.0 69 66.7
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 2.3e-15 86.3 103 49.5
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 5.2e-15 85.1 69 63.8
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.2e-13 79.7 109 44.0
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 2.9e-13 79.3 96 49.0
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 5.4e-12 75.1 75 54.7
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 1.6e-11 73.6 67 67.2
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 1.3e-10 70.5 85 51.8
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.8e-08 62.8 144 37.5


User provided reference genes

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