Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.9e-147 525.8 262 100.0
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.7e-141 505.4 260 96.2
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 6.6e-140 500.7 262 95.0
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 1.8e-137 492.7 260 93.5
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 4.0e-137 491.5 260 93.5
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 6.8e-137 490.7 260 93.8
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.6e-136 488.8 260 93.5
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 7.6e-136 487.3 260 93.1
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 1.3e-135 486.5 263 92.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 4.9e-135 484.6 263 92.0
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 3.2e-134 481.9 263 90.9
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 1.2e-133 479.9 259 92.7
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 2.9e-119 432.2 260 82.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 9.3e-118 427.2 267 79.8
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 1.7e-103 379.8 291 64.6
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 2.5e-102 375.9 291 64.6
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.5e-102 375.9 274 66.8
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 2.5e-102 375.9 274 66.8
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 7.1e-102 374.4 284 65.1
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 9.3e-102 374.0 278 65.8
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 2.7e-101 372.5 264 68.2
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 6.0e-101 371.3 290 64.8
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 7.9e-101 370.9 296 62.5
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.0e-100 370.5 273 65.9
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.0e-100 369.0 281 64.8
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 6.7e-100 367.9 296 61.5
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 1.5e-99 366.7 285 64.6
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 1.9e-99 366.3 283 65.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 1.9e-99 366.3 289 62.6
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 2.5e-99 365.9 290 61.7
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 2.5e-99 365.9 283 64.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 2.5e-99 365.9 283 65.0
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 5.7e-99 364.8 284 62.3
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.7e-99 364.8 291 63.2
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 9.7e-99 364.0 285 62.5
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 1.3e-98 363.6 274 65.7
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 1.6e-98 363.2 297 60.9
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 6.3e-98 361.3 301 61.8
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 6.3e-98 361.3 282 61.7
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.1e-97 360.5 287 63.1
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 4.1e-97 358.6 274 64.2
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 6.9e-97 357.8 300 60.7
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 9.0e-97 357.5 295 62.4
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 2.0e-96 356.3 288 62.2
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 2.6e-96 355.9 284 62.0
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 4.5e-96 355.1 283 64.3
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 5.9e-96 354.8 290 62.4
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 7.7e-96 354.4 289 61.9
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 7.7e-96 354.4 286 63.3
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 1.0e-95 354.0 284 63.4
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 1.3e-95 353.6 281 60.5
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 1.3e-95 353.6 268 66.0
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 6.5e-95 351.3 280 63.2
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 8.5e-95 350.9 283 61.5
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 1.4e-94 350.1 313 57.2
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 1.4e-94 350.1 258 66.7
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 1.4e-94 350.1 287 59.9
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 4.2e-94 348.6 219 76.3
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 4.2e-94 348.6 279 61.6
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 5.5e-94 348.2 275 63.3
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 9.4e-94 347.4 271 63.8
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.2e-93 347.1 280 62.9
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 2.1e-93 346.3 271 62.7
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 2.1e-93 346.3 275 62.9
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 2.7e-93 345.9 286 61.9
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 3.6e-93 345.5 291 58.1
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 3.6e-93 345.5 275 62.9
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 6.1e-93 344.7 282 60.3
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 3.0e-92 342.4 219 75.3
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 3.0e-92 342.4 272 63.2
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.9e-92 342.0 282 59.9
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 3.9e-92 342.0 282 60.3
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 1.1e-91 340.5 282 60.3
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 1.5e-91 340.1 256 63.3
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 3.3e-91 339.0 278 59.7
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 4.3e-91 338.6 287 55.7
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 8.2e-90 334.3 282 58.9
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 8.2e-90 334.3 277 59.9
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.1e-89 334.0 290 59.7
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 2.4e-89 332.8 276 60.9
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 3.1e-89 332.4 287 59.2
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 3.1e-89 332.4 293 59.4
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 4.1e-89 332.0 276 60.9
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 5.3e-89 331.6 312 56.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 7.7e-88 327.8 284 58.8
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 4.5e-80 302.0 298 52.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 1.7e-79 300.1 270 55.6
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 1.6e-77 293.5 279 53.0
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 3.6e-77 292.4 179 76.5
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 2.3e-76 289.7 179 76.0
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 3.0e-76 289.3 324 47.5
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.4e-75 285.4 189 73.0
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 5.7e-75 285.0 287 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 7.4e-75 284.6 227 59.9
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 7.4e-75 284.6 282 53.9
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 9.7e-75 284.3 189 72.5
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 1.7e-74 283.5 279 54.8
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 4.8e-74 282.0 305 48.2
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 3.5e-72 275.8 171 76.6
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 8.5e-71 271.2 155 81.3
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.9e-70 270.0 166 77.1
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 7.2e-70 268.1 279 50.2
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 2.0e-67 260.0 296 50.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.6e-67 259.6 154 76.6
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.6e-67 259.6 282 50.0
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 2.9e-55 219.5 284 44.4
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 8.6e-55 218.0 222 52.3
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 2.7e-48 196.4 282 41.8
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 1.5e-43 180.6 111 73.9
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 1.6e-40 170.6 110 75.5
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 2.0e-40 170.2 263 40.3
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 4.0e-36 156.0 140 57.9
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 9.8e-35 151.4 185 44.9
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 6.0e-32 142.1 190 43.7
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 1.7e-23 114.0 99 62.6
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 5.8e-11 72.4 55 61.8
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 6.4e-10 68.9 104 37.5
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 1.9e-09 67.4 48 64.6


User provided reference genes

Program Settings