Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 4.5e-74 283.5 156 100.0
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 2.3e-62 244.6 156 82.1
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 2.0e-50 204.9 160 71.9
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 3.6e-47 194.1 125 79.2
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 8.2e-44 183.0 156 66.0
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 9.1e-43 179.5 163 65.6
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 2.2e-36 158.3 152 57.2
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 2.8e-36 157.9 152 56.6
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.8e-36 157.1 162 58.0
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 6.3e-36 156.8 152 57.9
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.0e-35 153.3 163 57.1
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 7.0e-35 153.3 152 56.6
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.9e-33 147.9 149 57.0
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.7e-31 140.6 134 56.7
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.7e-31 140.6 163 53.4
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.7e-31 140.6 163 53.4
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.5e-29 135.6 167 49.7
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 3.3e-29 134.4 134 55.2
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.8e-28 130.6 134 56.0
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 4.8e-28 130.6 150 50.0
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-26 125.9 159 49.1
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-26 125.9 159 49.1
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.7e-26 123.2 140 54.3
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.0e-25 122.9 125 55.2
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.0e-25 122.9 125 55.2
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-25 121.7 108 57.4
Aa31sc233G10 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.2e-25 121.7 168 47.6
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 4.5e-18 97.4 127 44.1
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 2.9e-17 94.7 136 42.6
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.2e-15 89.4 134 39.6
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 1.6e-15 89.0 134 40.3
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.6e-15 89.0 136 39.7
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.8e-15 88.2 134 38.8
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 6.1e-15 87.0 120 41.7
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 2.3e-14 85.1 133 38.3
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 3.0e-14 84.7 133 38.3
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 3.0e-14 84.7 135 40.7
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 1.2e-13 82.8 135 37.8
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 2.0e-13 82.0 117 41.0
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.6e-13 81.6 147 34.7
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.4e-13 80.9 134 37.3
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 4.4e-13 80.9 147 34.7
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 5.7e-13 80.5 133 36.1
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 5.7e-13 80.5 118 41.5
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 9.8e-13 79.7 122 38.5
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 9.8e-13 79.7 134 37.3
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 1.3e-12 79.3 118 38.1
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 1.7e-12 79.0 123 38.2
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 1.7e-12 79.0 124 38.7
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.2e-12 78.6 147 33.3
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 2.8e-12 78.2 118 37.3
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 3.7e-12 77.8 133 36.8
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 3.7e-12 77.8 118 37.3
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 3.7e-12 77.8 119 37.0
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 4.9e-12 77.4 134 35.8
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 4.9e-12 77.4 134 36.6
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 1.1e-11 76.3 144 36.1
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 4.1e-11 74.3 117 37.6
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 7.0e-11 73.6 117 36.8
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 1.6e-10 72.4 123 33.3
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 3.5e-10 71.2 109 38.5
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 5.0e-09 67.4 118 32.2
Aa31LG5G21690 Aethionema arabicum HOM05D006694 ORTHO05D008240 4.3e-08 64.3 118 39.8
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 5.6e-08 63.9 141 30.5
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 2.1e-07 62.0 120 33.3
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 2.1e-07 62.0 122 33.6
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 2.8e-07 61.6 103 34.0
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 8.0e-07 60.1 118 32.2
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 8.0e-07 60.1 79 39.2
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 1.4e-06 59.3 127 31.5
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 1.8e-06 58.9 118 31.4
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 2.3e-06 58.5 118 31.4
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 4.0e-06 57.8 80 36.2
BcaB07g33547 Brassica carinata HOM05D006694 ORTHO05D014504 5.2e-06 57.4 66 48.5
RcHm_v2.0_Chr7g0231581 Rosa chinensis HOM05D006694 ORTHO05D008240 6.8e-06 57.0 96 37.5
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 6.8e-06 57.0 117 35.0
ATR0697G204 Amborella trichopoda HOM05D006694 ORTHO05D008240 8.9e-06 56.6 119 31.9


User provided reference genes

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