Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G27652 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 3.7e-29 131.0 71 100.0
AL7G25060 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 8.6e-26 119.8 71 94.4
Carub.0007s1319 Capsella rubella HOM05D007900 ORTHO05D010306 1.2e-22 109.4 73 83.6
BcaB03g12540 Brassica carinata HOM05D007900 ORTHO05D010306 2.6e-22 108.2 71 87.3
Thhalv10027389m.g Eutrema salsugineum HOM05D007900 ORTHO05D010306 4.4e-22 107.5 71 87.3
CARHR235360 Cardamine hirsuta HOM05D007900 ORTHO05D010306 7.5e-22 106.7 71 87.3
BraA08t33997Z Brassica rapa HOM05D007900 ORTHO05D010306 4.9e-21 104.0 71 84.5
BcaC06g32675 Brassica carinata HOM05D007900 ORTHO05D010306 1.4e-20 102.4 71 78.9
BolC8t48716H Brassica oleracea HOM05D007900 ORTHO05D010306 1.9e-20 102.1 71 83.1
BraA03t14808Z Brassica rapa HOM05D007900 ORTHO05D010306 4.1e-20 100.9 71 74.6
Aa31LG1G13770 Aethionema arabicum HOM05D007900 ORTHO05D010306 9.2e-20 99.8 71 84.5
AL7G25030 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 1.0e-18 96.3 71 77.5
AT4G27657 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 1.3e-18 95.9 71 76.1
C08p10350 Brassica napus HOM05D007900 ORTHO05D010306 2.3e-18 95.1 67 82.1
Aa31LG3G9890 Aethionema arabicum HOM05D007900 ORTHO05D010306 1.9e-17 92.0 71 77.5
A01p19010 Brassica napus HOM05D007900 ORTHO05D010306 2.5e-17 91.7 71 77.5
C01p23960 Brassica napus HOM05D007900 ORTHO05D010306 2.5e-17 91.7 71 77.5
BraA01t01844Z Brassica rapa HOM05D007900 ORTHO05D010306 2.5e-17 91.7 71 77.5
A03p57440 Brassica napus HOM05D007900 ORTHO05D010306 4.3e-17 90.9 71 76.1
BraA03t14811Z Brassica rapa HOM05D007900 ORTHO05D010306 4.3e-17 90.9 71 76.1
BcaB05g22114 Brassica carinata HOM05D007900 ORTHO05D010306 5.6e-17 90.5 71 77.5
A08p20390 Brassica napus HOM05D007900 ORTHO05D010306 5.6e-17 90.5 67 79.1
AL7G25050 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 74.6
BcaB03g12541 Brassica carinata HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 73.2
BcaC03g14327 Brassica carinata HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 76.1
C02p17590 Brassica napus HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 76.1
BolC2t07890H Brassica oleracea HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 76.1
BraA02t06116Z Brassica rapa HOM05D007900 ORTHO05D010306 9.5e-17 89.7 71 76.1
BcaC09g50557 Brassica carinata HOM05D007900 ORTHO05D010306 1.2e-16 89.4 71 76.1
BolC1t02345H Brassica oleracea HOM05D007900 ORTHO05D010306 1.2e-16 89.4 71 76.1
Carub.0008s1444 Capsella rubella HOM05D007900 ORTHO05D010306 1.2e-16 89.4 71 78.9
C07p55650 Brassica napus HOM05D007900 ORTHO05D010306 2.1e-16 88.6 71 74.6
BolC7t46045H Brassica oleracea HOM05D007900 ORTHO05D010306 2.1e-16 88.6 71 74.6
BcaC06g32672 Brassica carinata HOM05D007900 ORTHO05D010306 3.6e-16 87.8 71 73.2
BcaC06g32673 Brassica carinata HOM05D007900 ORTHO05D010306 3.6e-16 87.8 71 73.2
A08p20380 Brassica napus HOM05D007900 ORTHO05D010306 3.6e-16 87.8 71 73.2
BcaC07g38289 Brassica carinata HOM05D007900 ORTHO05D031835 4.7e-16 87.4 71 73.2
BolC8t48718H Brassica oleracea HOM05D007900 ORTHO05D031835 4.7e-16 87.4 71 73.2
AT5G54145 Arabidopsis thaliana HOM05D007900 ORTHO05D010306 6.2e-16 87.0 71 74.6
BolC1t02340H Brassica oleracea HOM05D007900 ORTHO05D010306 6.2e-16 87.0 71 71.8
A02p10530 Brassica napus HOM05D007900 ORTHO05D010306 8.1e-16 86.7 71 74.6
C08p10360 Brassica napus HOM05D007900 ORTHO05D031835 8.1e-16 86.7 71 71.8
Carub.0007s1317 Capsella rubella HOM05D007900 ORTHO05D010306 8.1e-16 86.7 71 71.8
BraA08t33996Z Brassica rapa HOM05D007900 ORTHO05D010306 1.1e-15 86.3 71 71.8
A10p11450 Brassica napus HOM05D007900 ORTHO05D010306 1.4e-15 85.9 71 74.6
BraA10t43239Z Brassica rapa HOM05D007900 ORTHO05D010306 1.4e-15 85.9 71 74.6
AL8G29280 Arabidopsis lyrata HOM05D007900 ORTHO05D010306 1.8e-15 85.5 71 74.6
BcaB03g12542 Brassica carinata HOM05D007900 ORTHO05D010306 1.8e-15 85.5 71 74.6
BcaB08g35770 Brassica carinata HOM05D007900 ORTHO05D010306 1.8e-15 85.5 71 73.2
A03p57430 Brassica napus HOM05D007900 ORTHO05D010306 1.8e-15 85.5 71 71.8
BraA03t14810Z Brassica rapa HOM05D007900 ORTHO05D010306 1.8e-15 85.5 71 71.8
BcaC06g32670 Brassica carinata HOM05D007900 ORTHO05D010306 2.3e-15 85.1 71 71.8
A08p20370 Brassica napus HOM05D007900 ORTHO05D010306 5.2e-15 84.0 71 74.6
BolC9t57306H Brassica oleracea HOM05D007900 ORTHO05D010306 5.2e-15 84.0 71 73.2
BraA08t33994Z Brassica rapa HOM05D007900 ORTHO05D010306 5.2e-15 84.0 71 74.6
BcaNung01647 Brassica carinata HOM05D007900 ORTHO05D010306 6.8e-15 83.6 71 69.0
THA.LOC109116085 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 6.8e-15 83.6 71 70.4
C07p55640 Brassica napus HOM05D007900 ORTHO05D010306 8.9e-15 83.2 72 72.2
BolC7t46044H Brassica oleracea HOM05D007900 ORTHO05D010306 8.9e-15 83.2 72 72.2
CARHR267340 Cardamine hirsuta HOM05D007900 ORTHO05D010306 8.9e-15 83.2 71 73.2
CARHR235370 Cardamine hirsuta HOM05D007900 ORTHO05D010306 1.5e-14 82.4 71 66.2
BcaC07g38290 Brassica carinata HOM05D007900 ORTHO05D010306 2.0e-14 82.0 71 73.2
C08p10370 Brassica napus HOM05D007900 ORTHO05D010306 2.0e-14 82.0 71 73.2
BolC8t48719H Brassica oleracea HOM05D007900 ORTHO05D010306 2.0e-14 82.0 71 73.2
THA.LOC109116601 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 7.5e-14 80.1 71 67.6
BolC7t46043H Brassica oleracea HOM05D007900 ORTHO05D033326 9.9e-14 79.7 64 64.1
C07p55630 Brassica napus HOM05D007900 ORTHO05D033326 1.3e-13 79.3 64 64.1
A03p57420 Brassica napus HOM05D007900 ORTHO05D033326 3.7e-13 77.8 64 60.9
BcaC06g32674 Brassica carinata HOM05D007900 ORTHO05D010306 1.9e-12 75.5 71 64.8
Carub.0007s1318 Capsella rubella HOM05D007900 ORTHO05D010306 1.9e-12 75.5 71 70.4
BraA03t14809Z Brassica rapa HOM05D007900 ORTHO05D010306 3.2e-12 74.7 71 64.8
THA.LOC109116608 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 1.3e-10 69.3 71 62.0
AL7G25020 Arabidopsis lyrata HOM05D007900 ORTHO05D023649 5.1e-10 67.4 71 59.2
BolC1t02347H Brassica oleracea HOM05D007900 ORTHO05D023649 6.6e-10 67.0 71 56.3
THA.LOC109116602 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 6.6e-10 67.0 71 60.6
BraA01t01847Z Brassica rapa HOM05D007900 ORTHO05D023649 4.3e-09 64.3 71 54.9
A01p18970 Brassica napus HOM05D007900 ORTHO05D100243 5.6e-09 63.9 44 79.5
THA.LOC109116086 Tarenaya hassleriana HOM05D007900 ORTHO05D010306 1.6e-08 62.4 71 56.3
C01p23970 Brassica napus HOM05D007900 ORTHO05D023649 3.6e-08 61.2 71 54.9
A01p19040 Brassica napus HOM05D007900 ORTHO05D023649 1.1e-07 59.7 71 54.9
BcaNung01646 Brassica carinata HOM05D007900 ORTHO05D090574 7.6e-06 53.5 43 69.8


User provided reference genes

Program Settings