Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G27580 Arabidopsis thaliana HOM05D011225 ORTHO05D013207 5.0e-30 134.4 105 100.0
AL7G25180 Arabidopsis lyrata HOM05D011225 ORTHO05D013207 9.1e-24 113.6 106 77.4
CARHR235270 Cardamine hirsuta HOM05D011225 ORTHO05D013207 3.2e-21 105.1 106 67.9
Sp7g25500 Schrenkiella parvula HOM05D011225 ORTHO05D013207 3.6e-20 101.7 107 65.4
Carub.0007s1329 Capsella rubella HOM05D011225 ORTHO05D013207 3.0e-19 98.6 107 81.3
Thhalv10026645m.g Eutrema salsugineum HOM05D011225 ORTHO05D013207 3.4e-18 95.1 106 73.6
C07p55550 Brassica napus HOM05D011225 ORTHO05D013207 5.7e-18 94.4 105 58.1
BolC7t46034H Brassica oleracea HOM05D011225 ORTHO05D013207 5.7e-18 94.4 105 58.1
BcaC06g32682 Brassica carinata HOM05D011225 ORTHO05D013207 2.2e-17 92.4 105 72.4
A03p57350 Brassica napus HOM05D011225 ORTHO05D013207 1.8e-16 89.4 105 59.0
BraA03t14801Z Brassica rapa HOM05D011225 ORTHO05D013207 1.8e-16 89.4 105 59.0
BcaNung06686 Brassica carinata HOM05D011225 ORTHO05D013207 2.7e-15 85.5 105 54.3
BcaNung07038 Brassica carinata HOM05D011225 ORTHO05D013207 1.0e-14 83.6 105 54.3
C01p23720 Brassica napus HOM05D011225 ORTHO05D013207 2.3e-11 72.4 124 46.0
BolC1t02324H Brassica oleracea HOM05D011225 ORTHO05D013207 4.0e-11 71.6 120 45.8
BcaB01g04271 Brassica carinata HOM05D010585 ORTHO05D012989 5.4e-08 61.2 114 46.5
A03p14810 Brassica napus HOM05D010585 ORTHO05D012989 1.6e-07 59.7 120 47.5
BraA03t10774Z Brassica rapa HOM05D010585 ORTHO05D012989 1.6e-07 59.7 120 47.5
BcaB01g04273 Brassica carinata HOM05D010585 ORTHO05D012989 1.0e-06 57.0 117 57.3
CARHR267290 Cardamine hirsuta HOM05D010585 ORTHO05D012989 1.7e-06 56.2 116 38.8


User provided reference genes

Program Settings