Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.5e-92 342.8 165 100.0
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.8e-82 307.0 170 87.1
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.2e-80 302.4 172 86.6
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.4e-79 299.7 172 86.0
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 9.2e-71 270.4 166 81.9
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 1.3e-69 266.5 166 80.1
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 7.3e-68 260.8 169 78.7
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 6.4e-64 247.7 170 71.2
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 3.9e-61 238.4 177 68.9
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 1.1e-60 236.9 165 70.9
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 8.0e-59 230.7 166 71.7
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.8e-58 229.6 173 70.5
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 6.8e-58 227.6 173 68.8
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 1.7e-56 223.0 181 63.0
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 2.0e-54 216.1 166 63.9
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 6.0e-54 214.5 166 63.3
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 6.0e-54 214.5 166 63.3
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 6.6e-53 211.1 164 66.5
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 8.6e-53 210.7 174 63.8
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 4.3e-52 208.4 166 65.7
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 4.0e-50 201.8 170 61.2
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 4.9e-48 194.9 175 61.7
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 8.3e-48 194.1 177 61.6
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.9e-47 193.0 161 62.7
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 3.2e-47 192.2 187 59.4
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 4.1e-47 191.8 175 61.1
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 5.4e-47 191.4 175 61.1
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 5.4e-47 191.4 175 61.1
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 7.1e-47 191.0 176 60.2
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 7.1e-47 191.0 176 60.2
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 9.2e-47 190.7 187 58.8
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 9.2e-47 190.7 177 59.9
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-46 189.9 175 60.6
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 2.1e-46 189.5 177 60.5
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 2.1e-46 189.5 177 60.5
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 2.1e-46 189.5 177 60.5
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 2.1e-46 189.5 177 60.5
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 2.1e-46 189.5 183 60.1
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 3.5e-46 188.7 187 58.3
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 6.0e-46 188.0 177 59.3
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 7.8e-46 187.6 188 57.4
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 7.8e-46 187.6 177 58.8
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 7.8e-46 187.6 188 57.4
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 7.8e-46 187.6 188 57.4
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 7.8e-46 187.6 188 57.4
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 7.8e-46 187.6 181 58.6
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-45 187.2 183 59.0
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 1.3e-45 186.8 183 58.5
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-45 186.4 200 53.5
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-45 186.0 183 58.5
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 3.0e-45 185.7 177 59.3
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 3.9e-45 185.3 180 58.3
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 9.5e-44 180.6 177 58.2
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-43 180.3 173 57.2
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-43 180.3 173 57.2
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 1.6e-43 179.9 178 54.5
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-43 179.9 186 57.0
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 2.1e-43 179.5 180 58.3
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 2.1e-43 179.5 180 58.3
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 2.1e-43 179.5 180 58.3
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 2.8e-43 179.1 172 57.0
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 4.7e-43 178.3 180 57.2
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 1.4e-42 176.8 195 52.3
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 8.9e-42 174.1 173 55.5
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-41 173.7 202 51.5
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 2.6e-41 172.6 134 69.4
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 9.9e-41 170.6 183 50.8
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 3.2e-39 165.6 173 54.3
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 9.2e-39 164.1 134 67.9
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 8.6e-37 157.5 164 52.4
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 3.3e-36 155.6 162 53.7
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.1e-35 151.0 164 51.8
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.1e-34 149.1 157 51.0
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 4.0e-34 148.7 163 52.1
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 1.2e-33 147.1 155 51.6
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-32 142.5 154 48.7
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.4e-32 141.4 159 50.3
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 8.4e-32 141.0 159 49.1
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.2e-31 138.7 154 49.4
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.2e-31 138.7 154 49.4
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.2e-31 138.7 154 49.4
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.3e-31 137.5 157 48.4
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-26 123.6 154 45.5
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 1.1e-23 114.0 132 53.0
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 5.4e-23 111.7 157 42.0
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-20 103.6 134 40.3
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-20 103.2 162 38.9
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-19 100.5 108 50.0
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.3e-19 100.5 168 38.7
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-19 100.1 168 38.7
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 4.8e-19 98.6 165 38.8
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 6.2e-19 98.2 108 49.1
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 2.4e-18 96.3 158 38.6
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 9.0e-18 94.4 151 37.7
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-16 88.2 62 75.8
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 2.1e-14 83.2 62 72.6
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 2.7e-14 82.8 166 36.7
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 6.0e-14 81.6 75 57.3
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 6.7e-13 78.2 160 35.0
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 1.1e-12 77.4 152 33.6
Atru.chr2.3226 Acer truncatum HOM05D001264 ORTHO05D001167 7.4e-12 74.7 123 35.0
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 3.7e-11 72.4 149 30.9
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 1.4e-10 70.5 89 44.9
Dinv26537 Davidia involucrata HOM05D006536 ORTHO05D005877 4.0e-10 68.9 150 35.3
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 5.3e-10 68.6 145 33.1
Peaxi162Scf00450g00873 Petunia axillaris HOM05D006536 ORTHO05D005877 5.3e-10 68.6 150 34.7
SGA_v2.0_scaffold13G06717 Striga asiatica HOM05D006536 ORTHO05D005877 2.6e-09 66.2 126 33.3
Cfa020408 Carpinus fangiana HOM05D006536 ORTHO05D005877 4.5e-09 65.5 146 30.1
Peaxi162Scf00057g00136 Petunia axillaris HOM05D006536 ORTHO05D005877 4.5e-09 65.5 150 34.0
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 5.8e-09 65.1 129 34.1
Cfa020407 Carpinus fangiana HOM05D006536 ORTHO05D005877 7.6e-09 64.7 145 31.7
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 1.0e-08 64.3 153 30.1
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 1.3e-08 63.9 160 31.2
Migut.J01041 Erythranthe guttata HOM05D006536 ORTHO05D005877 1.7e-08 63.5 154 27.9
Migut.J01035 Erythranthe guttata HOM05D006536 ORTHO05D005877 3.8e-08 62.4 155 30.3
Peaxi162Scf00450g00816 Petunia axillaris HOM05D006536 ORTHO05D005877 3.8e-08 62.4 146 33.6
Nitab4.5_0000397g0170 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.1e-07 60.8 150 32.0
PGSC0003DMG400001033 Solanum tuberosum HOM05D006536 ORTHO05D005877 1.9e-07 60.1 151 30.5
COL.COLO4_09579 Corchorus olitorius HOM05D006536 ORTHO05D005877 2.5e-07 59.7 156 30.1
Peaxi162Scf00714g00424 Petunia axillaris HOM05D006536 ORTHO05D005877 3.2e-07 59.3 160 31.2
SGA_v2.0_scaffold13G06718 Striga asiatica HOM05D006536 ORTHO05D005877 5.5e-07 58.5 117 32.5
DCAR_022529 Daucus carota HOM05D006536 ORTHO05D005877 7.1e-07 58.2 116 32.8
Duzib268G0059 Durio zibethinus HOM05D006536 ORTHO05D005877 7.1e-07 58.2 144 26.4
unitig_8.g4307 Utricularia gibba HOM05D006536 ORTHO05D005877 7.1e-07 58.2 159 30.2
Nitab4.5_0006023g0020 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.2e-06 57.4 150 30.0
unitig_744.g24698 Utricularia gibba HOM05D009374 ORTHO05D005877 1.2e-06 57.4 150 28.7
Nitab4.5_0000472g0270 Nicotiana tabacum HOM05D006536 ORTHO05D005877 1.6e-06 57.0 150 30.7
Ah.06g183000 Amaranthus hybridus HOM05D001264 ORTHO05D001167 2.1e-06 56.6 143 27.3
DCAR_022530 Daucus carota HOM05D006536 ORTHO05D005877 2.1e-06 56.6 127 29.1
Solyc07g064210.2 Solanum lycopersicum HOM05D006536 ORTHO05D005877 2.1e-06 56.6 146 32.2
CDE05G1907 Ceratophyllum demersum HOM05D006536 ORTHO05D005877 2.7e-06 56.2 138 31.9
Sopen07g032360 Solanum pennellii HOM05D006536 ORTHO05D005877 2.7e-06 56.2 150 30.0
Nitab4.5_0004487g0010 Nicotiana tabacum HOM05D006536 ORTHO05D005877 3.5e-06 55.8 111 33.3
PGR083G0291 Punica granatum HOM05D006536 ORTHO05D005877 3.5e-06 55.8 150 28.7
EL10Ac4g07942 Beta vulgaris HOM05D009374 ORTHO05D005877 4.6e-06 55.5 147 27.9
PGR083G1686 Punica granatum HOM05D006536 ORTHO05D005877 4.6e-06 55.5 124 32.3
Eucgr.F03431 Eucalyptus grandis HOM05D006536 ORTHO05D005877 6.0e-06 55.1 149 28.9


User provided reference genes

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